Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f21
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DI96 Cluster: Chromosome undetermined scaffold_51, wh...    38   0.25 
UniRef50_UPI00015ADE50 Cluster: hypothetical protein NEMVEDRAFT_...    34   3.0  
UniRef50_UPI0000E4975E Cluster: PREDICTED: similar to laminin A ...    33   5.3  

>UniRef50_A0DI96 Cluster: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_51,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1184

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
 Frame = +1

Query: 31  DSNEFESRGCFRLHLGLLL-CQYCSYTSWGYNSDGCCKCRIDSKILCR*IECTGSCRK*L 207
           D N+    GC++     +  CQ C +   GY    C +C    K+     EC   C    
Sbjct: 383 DGNQIRFDGCYQCQFSCISECQLCEF---GY----CLQCNPSFKLSYDKQECLPQCNNNE 435

Query: 208 YSNHSHQYYDDNDYCCRRL*CNF*CHNC 291
            S +   Y+D ND C     C   C  C
Sbjct: 436 ISKYYGYYHDSNDECSET--CQLECQQC 461


>UniRef50_UPI00015ADE50 Cluster: hypothetical protein
           NEMVEDRAFT_v1g69851; n=1; Nematostella vectensis|Rep:
           hypothetical protein NEMVEDRAFT_v1g69851 - Nematostella
           vectensis
          Length = 138

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +1

Query: 88  CQYCSYTSWGYNSDGCCKCRIDSKILCR*IECTGSCRK*LYSNHSHQYYDDNDYCCRRL* 267
           C+Y S     Y+SD  C CR  S   CR       CR   Y +  H     N +C     
Sbjct: 58  CRYHSNCHCRYHSD--CHCRCHSNCHCR-YHSNCHCR---YHSDCHCRCLSNCHCRYHSN 111

Query: 268 CNF*CH-NCW*RL*RRHSCKC*CNFKC 345
           C+  CH NC  R      C C C+  C
Sbjct: 112 CHCRCHSNCHCRY--HSDCHCRCHSNC 136


>UniRef50_UPI0000E4975E Cluster: PREDICTED: similar to laminin A
           chain, putative; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to laminin A chain, putative -
           Strongylocentrotus purpuratus
          Length = 543

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 88  CQYCSYTSWGYNSDGCCKCRIDSKILCR*IECTGSC 195
           C  C +  W Y  +GC +C  D K+ C     TG C
Sbjct: 141 CDACLHGYWNYGPNGCYECNCDPKLRCD--PYTGEC 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 349,432,576
Number of Sequences: 1657284
Number of extensions: 4936964
Number of successful extensions: 12155
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12147
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)