Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f19
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.17 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.17 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.17 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.17 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.93 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -2

Query: 254 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 81
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 80  FI 75
           F+
Sbjct: 224 FL 225


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -2

Query: 254 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 81
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 80  FI 75
           F+
Sbjct: 224 FL 225


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -2

Query: 254 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 81
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 80  FI 75
           F+
Sbjct: 224 FL 225


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -2

Query: 254 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RIFKILIK*YKRSVV 81
           F  FLI +FT TLH V +   +  + P      G    NC+  V  +  +L +  K S  
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223

Query: 80  FI 75
           F+
Sbjct: 224 FL 225


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 552 IFPNIIISLLXYYVTQLCIFSSLHCTVFLM 463
           I P+ ++  + Y++ Q+C    LH T+FL+
Sbjct: 97  IVPSGVVYKIGYWLHQICHICELH-TIFLV 125


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 171 PETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 275
           P+ R     + V    E +  + EE+ +  +PN P
Sbjct: 324 PDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEP 358


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -2

Query: 410 NIYLFLYPIFVVGCVCVCRFLIN*TAQICQLVYKIE 303
           N++LF+  + ++  + +C  ++     I    YK+E
Sbjct: 155 NVWLFILWVGILSTIFLCDTILKKVDDILSQAYKLE 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 540 IIISLLXYYVTQLCIFSSLHCTVFLMLSFFYNLN 439
           +II L  YY     I  ++H  + + + +FY ++
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMH 265


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 160 PVRGPKPGLTQTTKASTT 213
           PV  P+P  TQTT++  T
Sbjct: 395 PVPTPEPQPTQTTESEPT 412


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 267 NTPTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKE 398
           N   I+Y++ Q   ++DQ+   S  ++  +  T    NK+++ E
Sbjct: 316 NHGKISYNVLQSMKYLDQVVCESLRLWPPAPQTDRLCNKNFVIE 359


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 519 YYVTQLCIFSSLHCTVFLMLSFFYN 445
           Y  TQ+ I   L   + L +SFF N
Sbjct: 127 YKRTQIFITCELFFVILLWISFFLN 151


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 538 NNFSLTVLCYTTMYFFKFTLYGVLN 464
           + +++T LC         T+YG+L+
Sbjct: 284 SGYTVTFLCLYLFLIITLTIYGLLS 308


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 544  KHNNFSLTVLCYTT 503
            K+ N+S+ VL YT+
Sbjct: 1169 KYTNYSMEVLAYTS 1182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,999
Number of Sequences: 336
Number of extensions: 3438
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)