Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f17
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.37 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 358 LFCNYLVI*IARLIYHVKIFYINYEQIIAICFYF 459
           LFC   +I    L++ + I+Y     II +C Y+
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYY 300


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -1

Query: 607 ASCYCFVYFIVLLLNHLD----LELSQFVVKCGKIQP*KRTSIY 488
           AS YCF Y+++++           L + +  C KI+  KR   Y
Sbjct: 73  ASLYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYY 116


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 543 LSSKSRWFSNKTIK*TKQ*QEAQK 614
           +S  S WF NK I+  K   +AQ+
Sbjct: 274 VSQVSNWFGNKRIRYKKNIGKAQE 297


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +1

Query: 373 LVI*IARLIYHVKIFYINYEQIIAICFYFGILMSFDFMYIYSYVSTVEFCH 525
           LV  +A L   + IF+ +Y+        F + M+    Y  + +  +++CH
Sbjct: 151 LVTIVATLTVTI-IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +1

Query: 373 LVI*IARLIYHVKIFYINYEQIIAICFYFGILMSFDFMYIYSYVSTVEFCH 525
           LV  +A L   + IF+ +Y+        F + M+    Y  + +  +++CH
Sbjct: 151 LVTIVATLTVTI-IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,778
Number of Sequences: 336
Number of extensions: 3565
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)