Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f10
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 628 HSLHP*AVVAIARINYLT*TFNCTLYPSPHKFN 530
           HS H  A  +I  ++      N  +YP P KF+
Sbjct: 392 HSGHKLAKASIVNLHIYDLHHNPAIYPDPEKFD 424


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 538 KFNFRVCIEIRSKTVSFSFKPGA 470
           K NF   +EI ++ V+   +PGA
Sbjct: 695 KENFHTALEIMNRAVNIGQQPGA 717


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 628 HSLHP*AVVAIARINYLT*TFNCTLYPSPHKFN 530
           HS H  A  +I  ++      N  +YP P KF+
Sbjct: 392 HSGHKLAKGSIVNLHIYDLHHNPAIYPDPEKFD 424


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 249 PFGRTAQPSPWRSPSALRPP 190
           P+  +AQP+P +SP+ +  P
Sbjct: 333 PYQISAQPTPSQSPNQIYQP 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,526
Number of Sequences: 336
Number of extensions: 4332
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)