Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f10
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            31   0.047
AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding pr...    24   4.1  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    23   7.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 30.7 bits (66), Expect = 0.047
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = -2

Query: 553  YPSPHKFNFRVCIEIRSKTVSFSFKPGAFVNIPVGVAIGAETLFQVVFPIAFV--SRTVW 380
            YPSP+ +     + +      F+F     +   VG  +GA +      P+ +   S + W
Sbjct: 2715 YPSPYVYAGNSPVSLIDPDGEFAFTLAVLILALVGAYLGAASANNCWNPLKWDWRSSSTW 2774

Query: 379  VYHLSDPVFHGSAPFTFVSSSVFKYIQSLSV 287
            +  L+  V   S PF   SS  F     LS+
Sbjct: 2775 IGLLTGAVTGASIPFNMASSVAFFVGMGLSL 2805


>AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding
           protein AgamOBP28 protein.
          Length = 134

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 462 FTKAPGLKENDTVLERISMQTRKLNLWGLG*RVQLKVQV 578
           F  A G  +ND V+ER+S+   K  +  L  +    V+V
Sbjct: 74  FMDAAGKLQNDYVIERLSLNREKSKVEALVKKCSAGVEV 112


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 346 SAPFTFVSS-SVFKYIQSLSVPHAPTVTACI 257
           S P+T  +   V +Y  S  VPH  T   CI
Sbjct: 19  SMPYTVATIFEVLRYSSSPIVPHVATEDTCI 49


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 245 SVEQPSLLRGVRHQHCDRLRKSQWYQH 165
           S  Q  +L+  + QH D +  S+ Y+H
Sbjct: 13  STSQNLMLQAAKEQHADVILVSELYRH 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,449
Number of Sequences: 2352
Number of extensions: 17722
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)