Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3f10
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-5|CAA99924.2| 747|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin ... 75 5e-14
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 29 4.3
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 29 4.3
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z75550-5|CAA99924.2| 747|Caenorhabditis elegans Hypothetical
protein T22C1.7 protein.
Length = 747
Score = 74.9 bits (176), Expect = 5e-14
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +2
Query: 155 GPEDVDTIGIYVGGRNADGERHGEGWAVLPNGDF-YTGCYCRGMRNGKGLYVFKNGARYE 331
G D D G YVGG +G+ HG G P Y G + G G+Y + +G Y+
Sbjct: 4 GRFDFDDGGTYVGGWE-EGKAHGHGVCTGPQAKGEYAGAWHYGFEVS-GVYTWPSGNTYQ 61
Query: 332 GEWRRAMKYGVGQMIYPDGS-RYEGDWKHDLKQGFGAYSYPNGDI-YEGAWFKGKRHGLG 505
G+W+ ++G+G I G Y+G+W K +G N Y+G W G G G
Sbjct: 62 GQWQNGKRHGLG--IEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYG 119
Query: 506 TYFYADSKVKFMGTWIEGTIEGSG 577
T Y DS + G W+ G G G
Sbjct: 120 TEIYVDSG-SYQGQWLRGMRHGYG 142
Score = 72.1 bits (169), Expect = 4e-13
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +2
Query: 245 NGDFYTGCYCRGMRNGKGLYVFKNGARYEGEWRRAMKYGV---GQMIYPDGSRYEGDWKH 415
+G Y G + G +G G+ G + +GE+ A YG G +P G+ Y+G W++
Sbjct: 10 DGGTYVGGWEEGKAHGHGVCT---GPQAKGEYAGAWHYGFEVSGVYTWPSGNTYQGQWQN 66
Query: 416 DLKQGFGAYSYPNGDIYEGAWFKGKRHGLGTYFYADSKVKFMGTWIEGTIEGSGQIIY-P 592
+ G G +Y+G W +G + G A+S+ ++ GTW G +G G IY
Sbjct: 67 GKRHGLGIEQRGRW-LYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVD 125
Query: 593 RYRYHGSWVKGMPKGTG 643
Y G W++GM G G
Sbjct: 126 SGSYQGQWLRGMRHGYG 142
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 326 YEGEWRRAMKYGVGQMIYPDGSRYEGDWKHDLKQGFGAYSYPNGDIYEGAW 478
Y GEW+ M+ G G DG +Y+G+W ++ K G+G ++ +G EG +
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRY 333
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 257 YTGCYCRGMRNGKGLYVFKNGARYEGEWRRAMKYGVGQMIYPDGSRYEGDWKHDL 421
Y G + MR+G G+ +G +Y+GEW K G G + DG++ EG +K+++
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRYKNNI 337
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 395 YEGDWKHDLKQGFGAYSYPNGDIYEGAWFKGKRHGLGTYFYAD 523
Y G+WK+D++ GFG +G Y+G W + G G + D
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKD 325
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 137 VEEKGEGPEDVDTIGIYVGGRNADGERHGEGWAVLPNGDFYTGCYCRGMRNGKGLYVFKN 316
+++ E + +I Y+G D R G G +G Y G + + G G+ FK+
Sbjct: 267 LQQPEEEAVEESSIETYMGEWKND-MRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKD 325
Query: 317 GARYEGEWR 343
G + EG ++
Sbjct: 326 GTKEEGRYK 334
>AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin
protein.
Length = 747
Score = 74.9 bits (176), Expect = 5e-14
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +2
Query: 155 GPEDVDTIGIYVGGRNADGERHGEGWAVLPNGDF-YTGCYCRGMRNGKGLYVFKNGARYE 331
G D D G YVGG +G+ HG G P Y G + G G+Y + +G Y+
Sbjct: 4 GRFDFDDGGTYVGGWE-EGKAHGHGVCTGPQAKGEYAGAWHYGFEVS-GVYTWPSGNTYQ 61
Query: 332 GEWRRAMKYGVGQMIYPDGS-RYEGDWKHDLKQGFGAYSYPNGDI-YEGAWFKGKRHGLG 505
G+W+ ++G+G I G Y+G+W K +G N Y+G W G G G
Sbjct: 62 GQWQNGKRHGLG--IEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYG 119
Query: 506 TYFYADSKVKFMGTWIEGTIEGSG 577
T Y DS + G W+ G G G
Sbjct: 120 TEIYVDSG-SYQGQWLRGMRHGYG 142
Score = 72.1 bits (169), Expect = 4e-13
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +2
Query: 245 NGDFYTGCYCRGMRNGKGLYVFKNGARYEGEWRRAMKYGV---GQMIYPDGSRYEGDWKH 415
+G Y G + G +G G+ G + +GE+ A YG G +P G+ Y+G W++
Sbjct: 10 DGGTYVGGWEEGKAHGHGVCT---GPQAKGEYAGAWHYGFEVSGVYTWPSGNTYQGQWQN 66
Query: 416 DLKQGFGAYSYPNGDIYEGAWFKGKRHGLGTYFYADSKVKFMGTWIEGTIEGSGQIIY-P 592
+ G G +Y+G W +G + G A+S+ ++ GTW G +G G IY
Sbjct: 67 GKRHGLGIEQRGRW-LYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVD 125
Query: 593 RYRYHGSWVKGMPKGTG 643
Y G W++GM G G
Sbjct: 126 SGSYQGQWLRGMRHGYG 142
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 326 YEGEWRRAMKYGVGQMIYPDGSRYEGDWKHDLKQGFGAYSYPNGDIYEGAW 478
Y GEW+ M+ G G DG +Y+G+W ++ K G+G ++ +G EG +
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRY 333
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 257 YTGCYCRGMRNGKGLYVFKNGARYEGEWRRAMKYGVGQMIYPDGSRYEGDWKHDL 421
Y G + MR+G G+ +G +Y+GEW K G G + DG++ EG +K+++
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRYKNNI 337
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 395 YEGDWKHDLKQGFGAYSYPNGDIYEGAWFKGKRHGLGTYFYAD 523
Y G+WK+D++ GFG +G Y+G W + G G + D
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKD 325
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 137 VEEKGEGPEDVDTIGIYVGGRNADGERHGEGWAVLPNGDFYTGCYCRGMRNGKGLYVFKN 316
+++ E + +I Y+G D R G G +G Y G + + G G+ FK+
Sbjct: 267 LQQPEEEAVEESSIETYMGEWKND-MRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKD 325
Query: 317 GARYEGEWR 343
G + EG ++
Sbjct: 326 GTKEEGRYK 334
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +2
Query: 350 MKYGVGQMIYPDGSRYEGDWKH-----DLKQGFGAYSYPNGDIYEGAW 478
++Y +G+ +Y D + DWK L F Y PNG+ G+W
Sbjct: 250 LRYLLGEGLYSDFKPDDTDWKMIDEMTTLYTNFAKYGNPNGNEGAGSW 297
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +2
Query: 350 MKYGVGQMIYPDGSRYEGDWKH-----DLKQGFGAYSYPNGDIYEGAW 478
++Y +G+ +Y D + DWK L F Y PNG+ G+W
Sbjct: 466 LRYLLGEGLYSDFKPDDTDWKMIDEMTTLYTNFAKYGNPNGNEGAGSW 513
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 429 VSAPIATPTGIFTKAPGLKENDTVLERISMQTRKLNLWGLG*RVQLKVQ 575
+S +ATPTG+ T + EN +L +++ ++ L GL +LK Q
Sbjct: 187 ISVAVATPTGLITP---IVENSDILGVLAISSKVKELSGLARESKLKPQ 232
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
F21G4.6 protein.
Length = 1885
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 232 PAFSVAFAISIATAYVNPNGINIFRPLSLFFDHSFFVNTIK 110
P ++A +S+ T Y+ + +NIF ++ + D NT+K
Sbjct: 967 PFSAIALPVSLITNYLTSDKVNIFEIINQWLDDPVPENTLK 1007
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,920,499
Number of Sequences: 27780
Number of extensions: 388389
Number of successful extensions: 1085
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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