Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3f05
(684 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 80 3e-16
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 68 1e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 66 4e-12
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 64 2e-11
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 64 2e-11
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 59 5e-10
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 52 6e-08
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 48 2e-06
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 39 8e-04
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 29 0.47
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.83
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 28 1.4
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 1.9
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 27 1.9
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 27 3.3
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 27 3.3
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 27 3.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 4.4
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 26 4.4
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 25 7.7
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 80.2 bits (189), Expect = 3e-16
Identities = 43/126 (34%), Positives = 71/126 (56%)
Frame = +2
Query: 263 ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISD 442
E+ KN+GND F+ NYQ+A Y++A+ + +A NRA L+ K E+ +SD
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 443 CDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSRLHTVVQ 622
D AL I K L R++A E LE++EEA RD ++ +D ++ ++ L RL ++
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELRRLQLELK 343
Query: 623 ERARQN 640
+ R++
Sbjct: 344 KSKRKD 349
Score = 65.7 bits (153), Expect = 6e-12
Identities = 39/94 (41%), Positives = 51/94 (54%)
Frame = +2
Query: 254 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKV 433
E AE K GN +K + Y EAI YT+AI+L + LA Y NRAA Y++ EFE
Sbjct: 21 ELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSA--LAIYYSNRAATYMQIGEFELA 78
Query: 434 ISDCDKALEIIPEDPKALFRRSQAFECLERFEEA 535
+ D ++ I P+ PK R QA+E L EA
Sbjct: 79 LCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEA 112
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 68.1 bits (159), Expect = 1e-12
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Frame = +2
Query: 254 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEK-GSRDL--ATYLKNRAAAYLKTKEF 424
E A++++ GN+ F S+ Y++A FYTKA LA+K G +D+ A Y NRAA L + +
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKA--LAQKCGDKDIEIACY-SNRAACNLLFENY 118
Query: 425 EKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSR 604
+V++DC + L+ KA +R ++A L+R++EA + V P + A+ +
Sbjct: 119 RQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCSLVHPNDPAILALSKE 178
Query: 605 L 607
L
Sbjct: 179 L 179
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 66.1 bits (154), Expect = 4e-12
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Frame = +2
Query: 254 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKV 433
++AE + KGN+ FKS ++ AI YT+ A R NRAAAYLK +
Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFG----NRAAAYLKVMAPAEC 452
Query: 434 ISDCDKALEIIPEDPKALFRRSQAFECLERFE---EAYRDAKTIFTVDP-TNKAVQPILS 601
I DC+KA+E+ P KA R++QA L+ + +A +A + +P T K ++ I S
Sbjct: 453 IRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIES 512
Query: 602 RLHTVVQERARQNAQTSNKVEQMFKL 679
+L + A Q Q + E M ++
Sbjct: 513 QLSKCMSAMASQR-QNETEEETMARI 537
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 248 VQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFE 427
++++A+ K GN+ +K N+ AI Y KA + +D+ TYL N AAAY + + +
Sbjct: 261 LKKKADQEKQIGNENYKKRNFPVAIEQYKKAWDTY----KDI-TYLNNLAAAYFEADQLD 315
Query: 428 KVISDCDKALE 460
I C+ A+E
Sbjct: 316 DCIKTCEDAIE 326
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 64.1 bits (149), Expect = 2e-11
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +2
Query: 254 EEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKV 433
+EA KN+ N K + +AI YTKAI L A NR+ A+LK++++
Sbjct: 3 KEALELKNEANKFLKEGHIVQAIDLYTKAIELDSTN----AILYSNRSLAHLKSEDYGLA 58
Query: 434 ISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQPILSRLHT 613
I+D KA+E PE KA FRR+ A + + +EA D + + P++ A + L
Sbjct: 59 INDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECEQ 118
Query: 614 VVQERARQNA 643
+V+ Q A
Sbjct: 119 LVKRIRFQEA 128
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 64.1 bits (149), Expect = 2e-11
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 260 AESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVIS 439
A K GN A+ + Y AI +YT+AI S D + NRAA Y +FE+VI
Sbjct: 151 AAELKTLGNKAYGQKEYANAIDYYTQAITC----SHD-PIFFSNRAACYAAIGDFEQVIK 205
Query: 440 DCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDP-TNKAVQPILSRLHTV 616
D +AL + KAL RRS A+E L + +EA D+ D N+++ + RL
Sbjct: 206 DTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMDSTVSCIFDGFANESMTATVERLLKK 265
Query: 617 VQER 628
V E+
Sbjct: 266 VAEK 269
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 59.3 bits (137), Expect = 5e-10
Identities = 38/115 (33%), Positives = 56/115 (48%)
Frame = +2
Query: 245 VVQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEF 424
V +EEAE K +GN+A +++YQ+A+ YTKAI + Y NRAAAY + +F
Sbjct: 78 VNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTS----PVYYSNRAAAYNQLGQF 133
Query: 425 EKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAVQ 589
E + D L + P +A R +A L A K DP N+ ++
Sbjct: 134 ENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNEVLK 188
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 52.4 bits (120), Expect = 6e-08
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Frame = +2
Query: 242 MVVQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEK---------GSRDLATYLKNR 394
M + + K N+AFK + Y+EA Y A+ LA + + L NR
Sbjct: 56 MALSTQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNR 115
Query: 395 AAAYLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEA 535
AAA + +F + ++D + AL+I K +R+++A E + R EEA
Sbjct: 116 AAAEIALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEA 162
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 47.6 bits (108), Expect = 2e-06
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +2
Query: 404 YLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKA 583
+L+ K + KV+ DC AL I P D K ++RR A+ L A RD + +DP N
Sbjct: 51 HLRKKSYTKVVHDCTYALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHSLELDPNNTY 110
Query: 584 VQPILSRLHTV 616
+Q L RL V
Sbjct: 111 IQKSLHRLKEV 121
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 38.7 bits (86), Expect = 8e-04
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +2
Query: 245 VVQEEAESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEF 424
+V E ++ GN+ F+ ++ +AI +T +++ L NR+ Y K +
Sbjct: 407 MVSALVEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDL 466
Query: 425 EKVISDCDKALEIIPED 475
+ + D D+ ++II E+
Sbjct: 467 KTCLQDVDELVDIIGEE 483
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 0.47
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +2
Query: 263 ESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISD 442
E +GN A+ +NY+EA+ Y +A+ +E S + L+NR +L K ++ +
Sbjct: 33 EQLVTQGNMAYAQKNYEEAVDKYGQALMQSE--SIHGSESLENRNVLWLYGKSLFQIAIE 90
Query: 443 CDKALEIIPEDPKALFRRSQAF---ECLERFEEAYRDAKTIFTVDPTNKAV 586
+ L +++ + +++F E + F + + + +TV+ N ++
Sbjct: 91 NSQVLGNALGAKESVSQATESFEEPEAIGSFTFSGQKIENKYTVNEENSSI 141
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 0.83
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 353 EKGSRDLATYLKN----RAAAYLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLE 520
E S++LA L++ + +A K++EK+ SD D+ + + ED + RS EC
Sbjct: 1027 ESSSKELAKQLEDAVREKDSALSFKKDYEKIRSDADRVITSLKEDIEK--ERSLMKECHS 1084
Query: 521 RFE 529
+E
Sbjct: 1085 NYE 1087
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 555 YLLWTQLTKLSNLFYHVYTL--*YKSELAKMLKQAIK 659
YL+ T ++ N+F H++TL +K+ L KM K++++
Sbjct: 20 YLVTTLISLKENVFLHIFTLTFLFKAFLLKMAKRSVE 56
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 407 LKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNKAV 586
L K F K I AL I P+D A +A+ R+ A + +DP + V
Sbjct: 661 LNAKNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPDDWYV 720
Query: 587 QPILSRL 607
+ ++ L
Sbjct: 721 KYFIATL 727
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 446 DKALEIIPEDPKALFRRSQAFECL-ERFEEAYRDAKTI 556
D +E+ P++ + L RRS+AFE L F + D ++
Sbjct: 407 DSTVEVNPDEKEGLERRSRAFELLINAFVQLQHDVNSL 444
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 311 QEAITFYTKAINLAEK--GSRDLATYLKNRAAAYLKTKEFEKVISDCDKALE 460
+E + + KAI A++ G ++ +KN+A Y + E+ + CD+ E
Sbjct: 89 EEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERGVQLCDETFE 140
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/89 (22%), Positives = 37/89 (41%)
Frame = +2
Query: 329 YTKAINLAEKGSRDLATYLKNRAAAYLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAF 508
+ + + E D+ +YL + EK + +CDKAL + E + F R
Sbjct: 212 FANILGIREGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPRIP-- 269
Query: 509 ECLERFEEAYRDAKTIFTVDPTNKAVQPI 595
E + RF E +T++ + V+ +
Sbjct: 270 ELMNRFLEPIDPIVIPYTINVSEHTVEKV 298
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 401 AYLKTKEFEKVISDCDKALEIIPEDPKALFRRSQAFECLERFEEAYRDAKTIFTVDPTNK 580
A+ K ++E+ + A++ P P+ +++ F C+ EEA K +D +++
Sbjct: 374 AHYKLGDYEESNYWLNLAIDHTPTYPELFLAKAKIFLCMGEIEEALCSFKRSVELDKSDR 433
Query: 581 AV 586
A+
Sbjct: 434 AL 435
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 260 AESYKNKGNDAFKSENYQEAITFYTKAINLAEKGSRDLATY-LKNRAAAYLKTKEFEKVI 436
AES K KSE E + + + + E+ DLA Y K+ L+ + +
Sbjct: 173 AESNKIMDETIQKSEKIDELLQYIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREH 232
Query: 437 SDCDKALEIIPEDPKALFRRS 499
+ + L+ + +D A R+
Sbjct: 233 DEINSVLDALEQDRIAALERN 253
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 548 WHLCRLLQISPNIQKLAISGTRLSDLLVLFLELYHSH*SLFRILWSLSRLR 396
+ L RLL P++ K A S ++ +L H+ L+ ILW R R
Sbjct: 536 YDLVRLLGQYPDVLKNAFRFQETSTVVTYLFKLTHAVSKLYDILWVRGRER 586
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 362 SRDLATYLKNRAAAYLKTKEFEK--VISDCDKALEIIPEDPKALFRRS 499
S++++ + A YLK + I D L+I PE+ KALFR++
Sbjct: 44 SQEISLPTQQAAVIYLKNRVSRSWSSIDDAPSPLDI-PEEQKALFRQN 90
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,672,853
Number of Sequences: 5004
Number of extensions: 54248
Number of successful extensions: 195
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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