Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e21
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0707 - 20212190-20214592                                         91   6e-19
02_05_1345 + 35825552-35825834,35825914-35826022,35826098-358261...    59   4e-09
05_01_0214 - 1615519-1616775                                           51   1e-06
12_01_0042 + 337131-337612,338727-338898,338996-339204,339414-33...    31   0.88 
11_01_0043 + 328272-328753,329233-329298,330082-330253,330357-33...    31   0.88 
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873...    30   1.5  

>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 45/116 (38%), Positives = 68/116 (58%)
 Frame = +1

Query: 352 IKEKFQNWLRLIYSDKNSRXXXXXXXXXXSFAFVELFYGVWTNSLGLISDAFHMFFDCTG 531
           + E     +R I +++ SR          ++ FVE   G  ++SLGLISDA HM FDC  
Sbjct: 343 VYEAIMGPVRHILNERKSRKIAAFLLINTAYMFVEFTSGFMSDSLGLISDACHMLFDCAA 402

Query: 532 LVAGLAASLVSKWRSNERFSYGYARAEVLAGFVNGLFLLFIAFFIMSEAVERAIEP 699
           L  GL AS +++  +N  ++YG  R EVL+G+VN +FL+ +   I+ E+ ER +EP
Sbjct: 403 LAIGLYASYIARLPANGLYNYGRGRFEVLSGYVNAVFLVLVGALIVLESFERILEP 458


>02_05_1345 +
           35825552-35825834,35825914-35826022,35826098-35826137,
           35827481-35827522,35827605-35827694,35828400-35828470,
           35829375-35829463,35829583-35829652,35829898-35830048,
           35830146-35830235,35830549-35830647
          Length = 377

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +1

Query: 439 SFAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVL 618
           +++  EL  G+ T  +GL+SDAFH+ F C  L   L A   S+ + +  ++YGY R EVL
Sbjct: 79  AYSATELAIGLLTARVGLVSDAFHLTFGCGILTFSLFAMAASRTKPDHLYTYGYKRLEVL 138

Query: 619 AGFVNGL 639
           A F N L
Sbjct: 139 AAFTNAL 145


>05_01_0214 - 1615519-1616775
          Length = 418

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/84 (29%), Positives = 43/84 (51%)
 Frame = +1

Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
           F  VE+  G+  NSL +++DA H+  D       L +   + W +  + SYG+ R E+L 
Sbjct: 68  FMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYGFFRIEILG 127

Query: 622 GFVNGLFLLFIAFFIMSEAVERAI 693
             V+   +  +A  ++ EA+ R I
Sbjct: 128 ALVSIQLIWLLAGILVYEAIVRLI 151


>12_01_0042 +
           337131-337612,338727-338898,338996-339204,339414-339572,
           339914-340262
          Length = 456

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -2

Query: 437 KFSNKKRNKFLEFLSE*INRSQF*NFSLIPEMGPRDGRVSFCISGNIVS 291
           KF  K RNK L F+ + +NR+Q+ +   + E    DGR     +G+++S
Sbjct: 166 KFLEKLRNKRLVFVGDSVNRNQWVSMVCMVEHFIPDGRKMRVYNGSLIS 214


>11_01_0043 +
           328272-328753,329233-329298,330082-330253,330357-330565,
           330779-330937,331279-331627
          Length = 478

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -2

Query: 437 KFSNKKRNKFLEFLSE*INRSQF*NFSLIPEMGPRDGRVSFCISGNIVS 291
           KF  K RNK L F+ + +NR+Q+ +   + E    DGR     +G+++S
Sbjct: 188 KFLEKLRNKRLVFVGDSVNRNQWVSMVCMVEHFIPDGRKMRVYNGSLIS 236


>01_06_1513 -
           37884198-37884485,37884966-37886951,37886976-37887305,
           37887397-37887471,37887543-37887734,37887922-37888173,
           37888248-37888803,37888881-37889088,37889624-37889736,
           37890029-37890060,37890545-37890619
          Length = 1368

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 23/82 (28%), Positives = 35/82 (42%)
 Frame = -2

Query: 680 TASLIMKNAINKRNNPLTNPASTSALA*P*ENLSLDLHFDTSEAANPATRPVQSKNIWNA 501
           TAS I++    +R  PL +P+S+S    P     LD +   S   +   R       W A
Sbjct: 195 TASAILRGPFGQREGPLDSPSSSSFSTSP----YLDQNISKSRKTSHGAR---ESLYWGA 247

Query: 500 SDIRPKLFVHTP*KSSTKANDK 435
            + + K+    P K +T   DK
Sbjct: 248 RENKQKVKGSDPVKKTTHVGDK 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,071,657
Number of Sequences: 37544
Number of extensions: 302603
Number of successful extensions: 666
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)