Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3e21
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 115 3e-26
U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusi... 60 1e-09
U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusi... 60 1e-09
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 52 5e-07
AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 34 0.085
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 34 0.085
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr... 29 4.2
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 115 bits (277), Expect = 3e-26
Identities = 52/108 (48%), Positives = 68/108 (62%)
Frame = +1
Query: 376 LRLIYSDKNSRXXXXXXXXXXSFAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAAS 555
L I + +SR F VE YG WTNSLGLISD FHM FDC+ LV GL AS
Sbjct: 392 LNEILMNNDSRRIFWFLCVNLGFCGVEFLYGFWTNSLGLISDGFHMLFDCSALVMGLVAS 451
Query: 556 LVSKWRSNERFSYGYARAEVLAGFVNGLFLLFIAFFIMSEAVERAIEP 699
++++W F++G+ R E+L+GF+N LFL IA FI+ EA+ER +P
Sbjct: 452 VMARWPPTRHFTFGFGRVEILSGFINALFLCVIALFILIEALERLFDP 499
>U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform b protein.
Length = 561
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
F +E GV +S+ +++D++HM D L+ ++ R + R YG+ RAE L
Sbjct: 123 FCALEFITGVVCSSIAMLADSYHMAADVMALIVAFTCIKIAT-RPSTRLGYGWVRAETLG 181
Query: 622 GFVNGLFLLFIAFFIMSEAVERAI 693
GF NG+F+ + + EAV R I
Sbjct: 182 GFFNGIFMCTVCVLVFQEAVGRII 205
>U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform a protein.
Length = 519
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
F +E GV +S+ +++D++HM D L+ ++ R + R YG+ RAE L
Sbjct: 81 FCALEFITGVVCSSIAMLADSYHMAADVMALIVAFTCIKIAT-RPSTRLGYGWVRAETLG 139
Query: 622 GFVNGLFLLFIAFFIMSEAVERAI 693
GF NG+F+ + + EAV R I
Sbjct: 140 GFFNGIFMCTVCVLVFQEAVGRII 163
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +1
Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
F E G W SL +++DA HM D + + A ++ +++R S+GY RAEVL
Sbjct: 115 FIAAEFVGGFWAQSLAIMTDAGHMLSDLLSFIISIFAIRCARLPASKRLSFGYERAEVLG 174
Query: 622 GFVNGLFLLFIAFFIMSEAVERAI 693
+ + L + ++ A++R +
Sbjct: 175 ALTSVIILWVLTTVLVVVAIQRIV 198
>AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical
protein Y39E4A.2a protein.
Length = 391
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +1
Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
F E G W SL +++DA HM D + + A ++ +++R S+GY RAEVL
Sbjct: 96 FIAAEFVGGFWAQSLAIMTDAGHMLSDLLSFIISIFAIRCARLPASKRLSFGYERAEVLG 155
Query: 622 GFVNGLFLLFIAFFIMSEAVERAI 693
+ + L + ++ A++R +
Sbjct: 156 ALTSVIILWVLTTVLVVVAIQRIV 179
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +1
Query: 442 FAFVELFYGVWTNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLA 621
F E+ GV SL +++DA H+ D ++ L + +++ +++ S+G+ RAEVL
Sbjct: 64 FMVCEVIGGVLAGSLAIVTDAAHLLTDFASVLISLFSLYIARRPPSQKMSFGFHRAEVLG 123
Query: 622 GFVNGLFLLFI 654
F + +FL++I
Sbjct: 124 AFFS-VFLIWI 133
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 475 TNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLAGFVNGLFLLFI 654
++S+ L+S + F A L + +++ + +FSYG AR VLA F +
Sbjct: 40 SHSIVLMSTLWITIFSFCSQFASLYSMSITE-KPTHKFSYGLARVPVLAVFSTTVLAQLF 98
Query: 655 AFFIMSEAVERAIEP 699
+ F+ E+ E + P
Sbjct: 99 SIFLSKESFEHLLSP 113
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 475 TNSLGLISDAFHMFFDCTGLVAGLAASLVSKWRSNERFSYGYARAEVLAGFVNGLFLLFI 654
++S+ L+S + F A L + +++ + +FSYG AR VLA F +
Sbjct: 58 SHSIVLMSTLWITIFSFCSQFASLYSMSITE-KPTHKFSYGLARVPVLAVFSTTVLAQLF 116
Query: 655 AFFIMSEAVERAIEP 699
+ F+ E+ E + P
Sbjct: 117 SIFLSKESFEHLLSP 131
>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
protein F56D5.9 protein.
Length = 1132
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3
Query: 166 IVIIRISDLILFLKLMLIMYSLKFSGR 86
IV+I L+LF+ L++I+YS+ +GR
Sbjct: 732 IVLIIFGSLVLFIILLIILYSITPNGR 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,518,861
Number of Sequences: 27780
Number of extensions: 287697
Number of successful extensions: 648
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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