Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e21
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   4.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   8.5  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +1

Query: 259 EVCDETIGSIEDTMLPLIQKDTRPSRGPISGIKEKFQNWLRLIYSDKN 402
           E C++ + S+      +    TRPS+ PI  I ++  + L  + + K+
Sbjct: 6   EPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKS 53


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 181 YITSTIVIIRISDLILFLKLMLI 113
           YI S  VIIR + +   LK+M +
Sbjct: 10  YILSVAVIIRANGINEILKIMAV 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,345
Number of Sequences: 438
Number of extensions: 3572
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)