Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e19
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 614 HSFVLVSETEMLWYNVKINVTLRNISGKCYFL 709
           +S + V      WY +  N+T  N + K Y+L
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWL 58


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 478 PQSALTSERLHSTRHHVKLL 419
           PQ+ L  E   ST+H+  LL
Sbjct: 123 PQNVLDEEEKSSTKHYAALL 142


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +2

Query: 590 LFDAVFL-YHSFVLVSE---TEMLWYNVKIN 670
           +FD +FL +    L  E   T  LWY++KI+
Sbjct: 147 IFDLIFLSFRCTKLCKEANKTAFLWYHIKID 177


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 118 ICTARQPFCP*TYLFDQLFLMT 183
           ICT  QP      +FD+L LM+
Sbjct: 273 ICTIHQPSSEVYSMFDKLLLMS 294


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 118 ICTARQPFCP*TYLFDQLFLMT 183
           ICT  QP      +FD+L LM+
Sbjct: 273 ICTIHQPSSEVYSMFDKLLLMS 294


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 CLRTKWLPSRADVTLNFFTF 94
           C++ KW+P    VT + F +
Sbjct: 155 CMKEKWIPLCNSVTFSNFGY 174


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 CLRTKWLPSRADVTLNFFTF 94
           C++ KW+P    VT + F +
Sbjct: 388 CMKEKWIPLCNSVTFSNFGY 407


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 CLRTKWLPSRADVTLNFFTF 94
           C++ KW+P    VT + F +
Sbjct: 388 CMKEKWIPLCNSVTFSNFGY 407


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 698 ICLRYFSVSR*FLHCTITFQS 636
           +CL YF++   FL C   F S
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYS 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,624
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)