Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e17
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.87 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.6  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.6  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   6.1  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +3

Query: 210 KTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKH 359
           K Q  C +C ++  +SY    H  T     P    I    + R +  R H
Sbjct: 77  KRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -1

Query: 460 KRILLLDQILFMFPLDPVDD 401
           K++LLL QI+ +FPL+ +++
Sbjct: 29  KKVLLLSQIVGVFPLNHLNE 48


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 222 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKH 359
           +C  C +R  +S + T H  T     P    + K  +S   +  KH
Sbjct: 51  RCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKH 96



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +3

Query: 222 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 365
           +C  C K   ++   T H  T    +P    +   R+S+  S   H +
Sbjct: 23  RCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR 70


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 222 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKH 359
           +C  C +R  +S + T H  T     P    + K  +S   +  KH
Sbjct: 307 RCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKH 352



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +3

Query: 222 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 365
           +C  C K   ++   T H  T    +P    +   R+S+  S   H +
Sbjct: 279 RCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR 326


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 119 KMPKEFKEQVIKTVTRIEESHNVVGVLYL 205
           K  KEFKE++IK +  + + ++V  V  L
Sbjct: 422 KSKKEFKEELIKFIEEMLQRNDVYFVTNL 450


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 119 KMPKEFKEQVIKTVTRIEESHNVVGVLYL 205
           K  KEFKE++IK +  + + ++V  V  L
Sbjct: 429 KSKKEFKEELIKFIEEMLQRNDVYFVTNL 457


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/55 (21%), Positives = 23/55 (41%)
 Frame = +3

Query: 186 LLEFCICQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESK 350
           L  +  C   + +CT   K+ + +  E        CNE +  ++ K     I++K
Sbjct: 38  LKNYVNCLLDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNK 92


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = +2

Query: 209 KDAVQMYTLPETVAQVLCRNLPPLNASMQRAVTEIDIEDTLVAYRIETKTSEVLVASDLD 388
           KD +Q Y     +A       P LNA ++RA+T+   E       ++ +    + A    
Sbjct: 38  KDLLQKYP---PIANCKLVQAPKLNAEVKRAITQQHSERDERLAHVQAQLGAAMGAVGTA 94

Query: 389 FTACV 403
            T C+
Sbjct: 95  LTFCL 99


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +3

Query: 204 CQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESK 350
           C   + KCT   +  ++   E        CNE   + + K     IE+K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENK 94


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +3

Query: 204 CQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESK 350
           C   + KCT   +  ++   E        CNE   + + K     IE+K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENK 94


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +3

Query: 204 CQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESK 350
           C   + KCT   +  +R   E        CNE   + + K     I++K
Sbjct: 46  CILGKGKCTPEGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKNK 94


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/62 (22%), Positives = 21/62 (33%)
 Frame = +3

Query: 168 LKRVTTLLEFCICQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIES 347
           +K    L  +  C   + KCT      +R   +  H     C+E       K     I+ 
Sbjct: 37  IKSDRLLKNYVNCLLEKGKCTPDGAELKRHLPDALHTECSKCSETQKNGSKKIMRHLIDH 96

Query: 348 KR 353
           KR
Sbjct: 97  KR 98


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 662  YALALHRFGVMVKTCVKEMDPFD 730
            +A+ +HRFG   +   K    FD
Sbjct: 1300 FAMMIHRFGTFSQIITKTQLDFD 1322


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 662  YALALHRFGVMVKTCVKEMDPFD 730
            +A+ +HRFG   +   K    FD
Sbjct: 1300 FAMMIHRFGTFSQIITKTQLDFD 1322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,575
Number of Sequences: 336
Number of extensions: 3708
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)