BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3e17
(760 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding pr... 26 1.5
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 7.7
>AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding
protein AgamOBP44 protein.
Length = 327
Score = 25.8 bits (54), Expect = 1.5
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 324 SSISISVTARC-ILALS-GGRFLHRTCATVSGNVYIWTASFDRYRT 193
++ I++T C +ALS GGR TC+ SG ++ S+ Y++
Sbjct: 269 AAAKIALTNLCPAVALSYGGRKPSSTCSKASGTGQVYNLSYPGYKS 314
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 568 NNGRRIC*GRYHDE*RRMSDNDKCECSRCHE 660
NNGR + YH + R +SDND+ + H+
Sbjct: 542 NNGRVL----YHPDLRPLSDNDQYSATLKHK 568
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,790
Number of Sequences: 2352
Number of extensions: 16257
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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