Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e16
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.37 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.9  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.9  

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
 Frame = +2

Query: 359 RIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVAILPQL-FLVSKTR-EAESITSHY 532
           ++  +L+ + +  + +  +  V + L +  IYL+   I   + F  +++   +  +   Y
Sbjct: 4   KLNMVLVKSMLQRIKMEEKLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILY 63

Query: 533 LFALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYL---YITKVLKGKKL 703
              L      ++  W+Y  V+E+  +++ I       IL+ DF YL   +I  +LK  KL
Sbjct: 64  NIILQVLFVSFVSYWLY-LVLEAD-DMLPIYKNTYLIILFADFAYLETTWICTLLKKDKL 121


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 593 QHNGKPSSRGTELYMNLKQTDNE 525
           Q  G+P  RGT++ +++K+   E
Sbjct: 167 QDRGEPLGRGTKIVLHMKEDQTE 189


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 575 WVYRYVVESHYELIAIISGVVQTILYCDFFYL---YITKVLKGKKL 703
           W+Y  V+E+  +++ I       IL+ DF YL   +I  +LK  KL
Sbjct: 60  WLY-LVLEAD-DMLPIYKNTYLIILFADFAYLETTWICTLLKKDKL 103


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 350 HGCDHRW 330
           +GC+HRW
Sbjct: 377 YGCEHRW 383


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 425 LEVLWTFSIYLESVAILPQL 484
           L  LW  +I+L S+ + P+L
Sbjct: 7   LVTLWKLTIFLSSMCLDPRL 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,839
Number of Sequences: 336
Number of extensions: 4248
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)