Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e10
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   6.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   6.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   8.2  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 6   RAQWYLQPAKYDKDNLFYIYNREYSKAL 89
           R  W    AKYDKD    +Y ++Y   +
Sbjct: 98  RDWWNELEAKYDKDG---VYRQKYKDVI 122


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 60  IYNREYSKALTLSRT 104
           IY REYS   T  +T
Sbjct: 213 IYQREYSPTFTQQQT 227


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 194 KCLNTPSVMFGTSDHSTIVSPGHAVTRGFKRPRQCQS 84
           +CL+ P    GT D   +V+  H   +     R C+S
Sbjct: 301 ECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCES 337


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 51 LFYIYNREYS 80
          L+YIY++ YS
Sbjct: 13 LYYIYSKHYS 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,838
Number of Sequences: 336
Number of extensions: 1384
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)