Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e10
         (344 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029107-1|ABJ17040.1|  314|Drosophila melanogaster IP14803p pro...    28   3.7  
AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-P...    28   3.7  
AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-P...    28   3.7  
AE014134-2728|AAF53539.3|  619|Drosophila melanogaster CG4580-PA...    27   5.0  

>BT029107-1|ABJ17040.1|  314|Drosophila melanogaster IP14803p
           protein.
          Length = 314

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 141 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 46
           C PR CG P   A    +  C  +GC+   NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271


>AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-PC,
           isoform C protein.
          Length = 1356

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 141 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 46
           C PR CG P   A    +  C  +GC+   NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271


>AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-PA,
           isoform A protein.
          Length = 1676

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 141 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 46
           C PR CG P   A    +  C  +GC+   NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271


>AE014134-2728|AAF53539.3|  619|Drosophila melanogaster CG4580-PA
           protein.
          Length = 619

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 209 LKYNLKCLNTPSVMFGTSDHSTIVSPGHAVT 117
           L+Y L C   P  M   S +  ++SPG  +T
Sbjct: 96  LRYYLSCRGAPRNMDSLSQYLKVISPGEGLT 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,150,948
Number of Sequences: 53049
Number of extensions: 251442
Number of successful extensions: 468
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)