Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e07
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 403 QSFKCKISYYNNKNRIDQGQNYNET*NQRSN 311
           Q F C+   Y N++  DQ   YN+    R N
Sbjct: 173 QVFTCRCKDYKNEDLEDQPVVYNDVNGVRIN 203


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = -2

Query: 333 RHKISVPINLRNVGKGAPCRHSARMSLPN---SRSNKR 229
           RH+++ P    N G G P R S      N   S SN R
Sbjct: 338 RHEVTRPAAPANRGNGFPKRSSDEQQWRNNQPSTSNNR 375


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 495 EPRCGKYVRF*HVESSSLTH 554
           +PR   +VRF H+++   T+
Sbjct: 465 QPRGSVFVRFTHLQNQDFTY 484


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,452
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)