Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3e05
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.59 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.78 
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    24   1.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 405  GDVTPGRSGSQLPKYRGFEQLP 340
            G   PG +GS+ P   GFE+ P
Sbjct: 1116 GSSGPGSTGSKSPPVAGFEESP 1137


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 362 YLGSWLPDRPGVTSPRCWR 418
           +L  WLP   G + P  WR
Sbjct: 210 FLPKWLPPLQGFSDPSAWR 228


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 72 WHEQRQVKQHSNQRPPQHRP 13
          W  QR   +H   +PPQ RP
Sbjct: 19 WVPQRLRIRHHGDKPPQERP 38


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 167 WVRKRGRCFVLTPTPASR 220
           WV K G    +TPT   R
Sbjct: 4   WVLKVGNVLAMTPTKEKR 21


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 167 WVRKRGRCFVLTPTPASR 220
           WV K G    +TPT   R
Sbjct: 4   WVLKVGNVLAMTPTKEKR 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,551
Number of Sequences: 336
Number of extensions: 2869
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)