Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3d21
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4... 91 5e-18
BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4... 91 5e-18
BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4... 90 8e-18
BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1... 51 3e-06
AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1... 51 3e-06
AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein. 51 3e-06
AC093081-1|AAQ96848.1| 125|Homo sapiens unknown protein. 42 0.002
>BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 90.6 bits (215), Expect = 5e-18
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Frame = +1
Query: 289 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 462
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 463 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTRV 642
F+N + + VK++IL+ L E LG AMTYTLFE ++ + + +T +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATSI 124
Query: 643 EKIV 654
I+
Sbjct: 125 SNII 128
>BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 90.6 bits (215), Expect = 5e-18
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Frame = +1
Query: 289 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 462
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 463 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTRV 642
F+N + + VK++IL+ L E LG AMTYTLFE ++ + + +T +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATSI 124
Query: 643 EKIV 654
I+
Sbjct: 125 SNII 128
>BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 89.8 bits (213), Expect = 8e-18
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 289 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 462
E Q E+E L+SIYEGD++F+++ ++QY+ + GD K+F++EISW YP P ++
Sbjct: 5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64
Query: 463 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 606
F+N + + VK++IL+ L E LG AMTYTLFE ++ + +
Sbjct: 65 NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFM 112
>BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 51.2 bits (117), Expect = 3e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Frame = +1
Query: 274 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 429
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 430 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 606
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI+
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115
>AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 51.2 bits (117), Expect = 3e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Frame = +1
Query: 274 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 429
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 430 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 606
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI+
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115
>AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein.
Length = 241
Score = 51.2 bits (117), Expect = 3e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Frame = +1
Query: 274 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 429
M+D E+Q E+E L+SIY D+F + T + + D++ L+ ++
Sbjct: 1 MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58
Query: 430 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 606
KYP E P + EIF ++L +IL +L +AE+ LG M +TL ++E+++EI+
Sbjct: 59 KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115
>AC093081-1|AAQ96848.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 460 LEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTR 639
+ F+N + + VK++IL+ L AE LG AMTYTLFE ++ + + +T
Sbjct: 1 MNAFFNNTISSAVKQSILAKLQEAAEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATS 60
Query: 640 VEKIV 654
+ I+
Sbjct: 61 ISNII 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,818,828
Number of Sequences: 237096
Number of extensions: 1679424
Number of successful extensions: 2972
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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