Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d19
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023959-1|ABB36463.1|  876|Drosophila melanogaster AT19777p pro...    30   2.8  
AE014134-544|AAF51156.1|  874|Drosophila melanogaster CG17258-PA...    30   2.8  
AY052117-1|AAK93541.1|  412|Drosophila melanogaster SD06613p pro...    29   8.5  
AE014297-3726|AAN14041.1|  412|Drosophila melanogaster CG11844-P...    29   8.5  
AE014297-3725|AAN14040.1|  412|Drosophila melanogaster CG11844-P...    29   8.5  
AE014297-3724|AAF56404.2|  443|Drosophila melanogaster CG11844-P...    29   8.5  

>BT023959-1|ABB36463.1|  876|Drosophila melanogaster AT19777p
           protein.
          Length = 876

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 490 ERYRRKQGRSSAATETRVRRSSA*LQRAPQFQRQQ 594
           E+  R+QG+S  A +TRV++ +A L +  Q +R+Q
Sbjct: 457 EKIEREQGQSCLARDTRVQKINAFLDKVRQEKRRQ 491


>AE014134-544|AAF51156.1|  874|Drosophila melanogaster CG17258-PA
           protein.
          Length = 874

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 490 ERYRRKQGRSSAATETRVRRSSA*LQRAPQFQRQQ 594
           E+  R+QG+S  A +TRV++ +A L +  Q +R+Q
Sbjct: 455 EKIEREQGQSCQARDTRVQKINAFLDKVRQEKRRQ 489


>AY052117-1|AAK93541.1|  412|Drosophila melanogaster SD06613p
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 683 GKREFDRRSGSDK 721
           GKREFDR+SGSD+
Sbjct: 144 GKREFDRQSGSDR 156


>AE014297-3726|AAN14041.1|  412|Drosophila melanogaster CG11844-PC,
           isoform C protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 683 GKREFDRRSGSDK 721
           GKREFDR+SGSD+
Sbjct: 144 GKREFDRQSGSDR 156


>AE014297-3725|AAN14040.1|  412|Drosophila melanogaster CG11844-PA,
           isoform A protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 683 GKREFDRRSGSDK 721
           GKREFDR+SGSD+
Sbjct: 144 GKREFDRQSGSDR 156


>AE014297-3724|AAF56404.2|  443|Drosophila melanogaster CG11844-PB,
           isoform B protein.
          Length = 443

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 683 GKREFDRRSGSDK 721
           GKREFDR+SGSD+
Sbjct: 175 GKREFDRQSGSDR 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,681,092
Number of Sequences: 53049
Number of extensions: 462462
Number of successful extensions: 1041
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)