BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3d17
(727 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 26 1.4
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 4.2
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.3
AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding pr... 23 7.3
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 9.6
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 25.8 bits (54), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 266 KKLLIYDYDYLHERNLVFVTMD 201
K +L+ D+ Y H+RNL + D
Sbjct: 88 KTVLVKDFSYFHDRNLYYNERD 109
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 713 IAD*APWYLRNVDLHDDHNWNFYA 642
IA + W +RN D DH + Y+
Sbjct: 240 IAQPSTWLVRNTDTRSDHRYITYS 263
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +3
Query: 426 KLILDARIMVWIAL-KFQTM 482
KL +D RIM +IAL +FQT+
Sbjct: 533 KLSMDNRIMTYIALHQFQTV 552
>AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding
protein AgamOBP14 protein.
Length = 188
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 314 LYHLKVYLNCPSYKCFKKLL 255
LY V+ NCP +CF + L
Sbjct: 72 LYLAGVFPNCPETQCFVRCL 91
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 230 ERNLVFVTMDYYGVSIISINLTMYLKVY 147
ERN + DY+ S+ +I L + L Y
Sbjct: 884 ERNQILNYFDYFFTSVFTIELLLKLVSY 911
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,658
Number of Sequences: 2352
Number of extensions: 13428
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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