Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d17
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical p...   118   4e-27
AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical ...   118   4e-27
Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical pr...   102   3e-22
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF039040-1|AAB94184.1|  553|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z73971-5|CAA98255.1|  187|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U29157-2|AAA68422.1|  205|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/128 (43%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = +2

Query: 311 IKPINENTVHKICSGQVVLNLAVAVKELVENSLDAGATKIDIRCKNYGMDSIEVSDNGSG 490
           I+ I++    ++ + QVV++L+ A+++L++NS+DAG+T IDIR KN G +SIEV DNGSG
Sbjct: 6   IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65

Query: 491 VNEDNFAALTLKYHTSKLSDYSDLLGVSSFGFRGEALSSLCALANLTVTTRHKNSNYGRR 670
           +   NF AL   + TSKL+ +SD   +++ GFRGEAL++LC ++++++ TR  ++  G R
Sbjct: 66  IEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTR 125

Query: 671 EDL-HSSN 691
               HS N
Sbjct: 126 LTYDHSGN 133


>AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score =  118 bits (284), Expect = 4e-27
 Identities = 56/128 (43%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = +2

Query: 311 IKPINENTVHKICSGQVVLNLAVAVKELVENSLDAGATKIDIRCKNYGMDSIEVSDNGSG 490
           I+ I++    ++ + QVV++L+ A+++L++NS+DAG+T IDIR KN G +SIEV DNGSG
Sbjct: 6   IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65

Query: 491 VNEDNFAALTLKYHTSKLSDYSDLLGVSSFGFRGEALSSLCALANLTVTTRHKNSNYGRR 670
           +   NF AL   + TSKL+ +SD   +++ GFRGEAL++LC ++++++ TR  ++  G R
Sbjct: 66  IEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTR 125

Query: 671 EDL-HSSN 691
               HS N
Sbjct: 126 LTYDHSGN 133


>Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical
           protein T28A8.7 protein.
          Length = 758

 Score =  102 bits (244), Expect = 3e-22
 Identities = 45/115 (39%), Positives = 81/115 (70%)
 Frame = +2

Query: 311 IKPINENTVHKICSGQVVLNLAVAVKELVENSLDAGATKIDIRCKNYGMDSIEVSDNGSG 490
           I+ + ++ V+++ +G+V+     A+KELVENSLDAGAT+I +  +N G+  ++VSDNG G
Sbjct: 4   IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63

Query: 491 VNEDNFAALTLKYHTSKLSDYSDLLGVSSFGFRGEALSSLCALANLTVTTRHKNS 655
           +  ++FA +  ++ TSKL  + DL+ + ++GFRGEAL+SL  +A + + ++  ++
Sbjct: 64  IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADA 118


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +2

Query: 350  SGQVVLNLAVAVKELVENSLDAGATKIDIRCKNYGMDSIEVSDNGSGVNEDNFAALT 520
            SG+++ N  +  KE++  S D G  +     K+ G D  +  D+  G ++ N A ++
Sbjct: 1179 SGELLNNWLMLSKEILATSNDHGLVRKKEEKKDRGEDDADDDDDEDGDDDTNLAGIS 1235


>Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical
           protein F13E9.9 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 467 EVSDNGSGVNEDNFAALTLKYHTSKLSDYSD 559
           E+ DNG G NED    ++ K  TSK  DY +
Sbjct: 30  ELVDNGKGKNEDKGKKISFKRKTSKF-DYDN 59


>AF039040-1|AAB94184.1|  553|Caenorhabditis elegans Hypothetical
           protein T22B11.4a protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -3

Query: 284 PSYKCFKKLLIYDYDYLHERNLVFVTMDYYGVSIISINLTMYLKVYNDISQQKAESKTTL 105
           PS + F + + Y  DYL  RN+   T+  + V   S+ L     +Y +   +  ESKT+ 
Sbjct: 473 PSEQNFLQRIYYSPDYLRVRNITIATLIIFAV-FCSLGLCC---IYKNKCCKSKESKTSN 528

Query: 104 RY 99
            Y
Sbjct: 529 GY 530


>Z73971-5|CAA98255.1|  187|Caenorhabditis elegans Hypothetical
           protein C50H2.7 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 293 GTPSSDIKPINENTVHKICSGQVVLNLAVAVKEL--VENSLDAG 418
           G P S IKP++++ V  + S Q++L+L +  +EL    N L+ G
Sbjct: 48  GMPISKIKPLSDSQVLSVLS-QILLSLYIGKRELQFSHNDLNPG 90


>U29157-2|AAA68422.1|  205|Caenorhabditis elegans Hypothetical
           protein C34D10.1 protein.
          Length = 205

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 602 SSLCALANLTVTTRHKNSNYGRREDLHSSNTMVLSRLS 715
           S  C L  LTV++ H N +  R E +  SN M  S  S
Sbjct: 99  SGSCVLTLLTVSSEHTNPDEPRFEKVQQSNRMSSSTTS 136


>AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.6 protein.
          Length = 271

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -3

Query: 356 VPNKFY--EQYFHLWVLYHLKVYLNCPSYKCFKKLLIYDYDYLHERNLVF 213
           +P   Y   Q +H++ +YH+  Y   P Y       IY    ++   ++F
Sbjct: 30  IPYTIYTIHQIYHIYYIYHIYTYTKSPIYHIHHIYQIYHIHIINTLYIIF 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,360,754
Number of Sequences: 27780
Number of extensions: 320451
Number of successful extensions: 701
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)