Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d16
         (262 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034532-1|AAH34532.1|  327|Homo sapiens calcium channel, voltag...    30   1.5  
AF162692-1|AAF14538.1|  327|Homo sapiens putative voltage-gated ...    30   1.5  
AF142625-1|AAF03090.1|  327|Homo sapiens calcium channel gamma 4...    30   1.5  
BC101313-1|AAI01314.1|  340|Homo sapiens sideroflexin 5 protein.       29   3.6  
BC101312-1|AAI01313.1|  340|Homo sapiens sideroflexin 5 protein.       29   3.6  
BC101311-1|AAI01312.1|  340|Homo sapiens sideroflexin 5 protein.       29   3.6  
AY044437-1|AAK95826.1|  340|Homo sapiens sideroflexin 5 protein.       29   3.6  
AC012366-3|AAY14745.1|  340|Homo sapiens unknown protein.              29   3.6  

>BC034532-1|AAH34532.1|  327|Homo sapiens calcium channel,
           voltage-dependent, gamma subunit 4 protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +1

Query: 1   DRDSRSYTKAVVYSRN----LRGP*IMLTSVCLGLSEIISKKNRL*LSAGI 141
           D DS  Y   +V + +    L    ++L  +C+G   I S+KN + LSAGI
Sbjct: 93  DHDSSEYLLRIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGI 143


>AF162692-1|AAF14538.1|  327|Homo sapiens putative voltage-gated
           calcium channel gamma-4 subunit protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +1

Query: 1   DRDSRSYTKAVVYSRN----LRGP*IMLTSVCLGLSEIISKKNRL*LSAGI 141
           D DS  Y   +V + +    L    ++L  +C+G   I S+KN + LSAGI
Sbjct: 93  DHDSSEYLLRIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGI 143


>AF142625-1|AAF03090.1|  327|Homo sapiens calcium channel gamma 4
           subunit protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +1

Query: 1   DRDSRSYTKAVVYSRN----LRGP*IMLTSVCLGLSEIISKKNRL*LSAGI 141
           D DS  Y   +V + +    L    ++L  +C+G   I S+KN + LSAGI
Sbjct: 93  DHDSSEYLLRIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGI 143


>BC101313-1|AAI01314.1|  340|Homo sapiens sideroflexin 5 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 169 PVNTMFCLVIFQLKVRVCFFSKLFPTVLNRQTSTLFMVLVNSSSKQQLLYN 17
           PV ++ CL  F L + +     LFP +   +TS L   +  ++S + ++YN
Sbjct: 289 PVQSLVCLAAFGLALPLAI--SLFPQMSEIETSQLEPEIAQATSSRTVVYN 337


>BC101312-1|AAI01313.1|  340|Homo sapiens sideroflexin 5 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 169 PVNTMFCLVIFQLKVRVCFFSKLFPTVLNRQTSTLFMVLVNSSSKQQLLYN 17
           PV ++ CL  F L + +     LFP +   +TS L   +  ++S + ++YN
Sbjct: 289 PVQSLVCLAAFGLALPLAI--SLFPQMSEIETSQLEPEIAQATSSRTVVYN 337


>BC101311-1|AAI01312.1|  340|Homo sapiens sideroflexin 5 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 169 PVNTMFCLVIFQLKVRVCFFSKLFPTVLNRQTSTLFMVLVNSSSKQQLLYN 17
           PV ++ CL  F L + +     LFP +   +TS L   +  ++S + ++YN
Sbjct: 289 PVQSLVCLAAFGLALPLAI--SLFPQMSEIETSQLEPEIAQATSSRTVVYN 337


>AY044437-1|AAK95826.1|  340|Homo sapiens sideroflexin 5 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 169 PVNTMFCLVIFQLKVRVCFFSKLFPTVLNRQTSTLFMVLVNSSSKQQLLYN 17
           PV ++ CL  F L + +     LFP +   +TS L   +  ++S + ++YN
Sbjct: 289 PVQSLVCLAAFGLALPLAI--SLFPQMSEIETSQLEPEIAQATSSRTVVYN 337


>AC012366-3|AAY14745.1|  340|Homo sapiens unknown protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 169 PVNTMFCLVIFQLKVRVCFFSKLFPTVLNRQTSTLFMVLVNSSSKQQLLYN 17
           PV ++ CL  F L + +     LFP +   +TS L   +  ++S + ++YN
Sbjct: 289 PVQSLVCLAAFGLALPLAI--SLFPQMSEIETSQLEPEIAQATSSRTVVYN 337


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,092,070
Number of Sequences: 237096
Number of extensions: 661717
Number of successful extensions: 1276
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)