Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d16
         (262 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   3.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   3.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   3.3  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    20   4.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   5.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   5.8  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          19   7.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   7.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   7.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
 Frame = +3

Query: 27  SCCLLEEFTRTINNVDVCLFRTVGNN---FEKKQTLTFSWNITRQNIVFTGWLVL 182
           S   +E  T+  N ++   F         F        ++ +TRQ ++  GW VL
Sbjct: 92  SVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHTYLVTRQKLLELGWDVL 146


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 261 FFFTSITFNTFMYITAYDINADTKME 184
           FFF  +    F+Y    DI  D + E
Sbjct: 7   FFFILVITLIFLYFGEADIKKDCRKE 32


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 2/13 (15%)
 Frame = -1

Query: 34  QQLL--YNCENLC 2
           QQ++  YNCE LC
Sbjct: 239 QQIMARYNCERLC 251


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
          protein precursor protein.
          Length = 153

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 33 CLLEEFTRTINNVDVC 80
          CLL E  + I  VD C
Sbjct: 14 CLLNETAKAIIGVDEC 29


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 102 YFRQS*TDRR 73
           YFRQS  DRR
Sbjct: 56  YFRQSWVDRR 65


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 4/13 (30%), Positives = 9/13 (69%)
 Frame = +1

Query: 190 FCVCIYIICCNIH 228
           F +C+ ++  N+H
Sbjct: 316 FSICVTVVVLNVH 328


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 141 ITRQNIVFTGWLVL 182
           +TRQ ++  GW VL
Sbjct: 132 VTRQKLLELGWDVL 145


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 116 FFFEIISDSPKQTDVNIIYGPR 51
           F   I +D P +  + I  GP+
Sbjct: 502 FHITINADKPMKAAIRIFIGPK 523


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 116 FFFEIISDSPKQTDVNIIYGPR 51
           F   I +D P +  + I  GP+
Sbjct: 502 FHITINADKPMKAAIRIFIGPK 523


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 122 SLFFFEIISDSPKQTD 75
           SL FF+++ + PK  D
Sbjct: 34  SLEFFDLLPEDPKLYD 49


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 141 ITRQNIVFTGWLVL 182
           +TRQ ++  GW VL
Sbjct: 254 VTRQKLLELGWDVL 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,576
Number of Sequences: 438
Number of extensions: 1276
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)