Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d14
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.3  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 280 GNPRTTSSPLCPSDNQPTPGLWDSCLMT 197
           G P+ T   L PS    +P L   CL T
Sbjct: 249 GRPKMTPQSLLPSQTGLSPYLRFGCLST 276


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 131 NVSTCLLGLVKSPLW 175
           N+ T L  L K PLW
Sbjct: 79  NIYTVLTALTKKPLW 93


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 131 NVSTCLLGLVKSPLW 175
           N+ T L  L K PLW
Sbjct: 79  NIYTVLTALTKKPLW 93


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 115 IDEFRECFYL 144
           IDEF ECF L
Sbjct: 223 IDEFNECFGL 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,583
Number of Sequences: 336
Number of extensions: 3151
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)