Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d11
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 259 RDQLDRSNPFYRPGDRTGQT*AP 191
           R+   R NP+YRP  RT +T  P
Sbjct: 223 REDQTRRNPYYRP--RTSRTEPP 243


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 RNCCLGCQGPMSGPCG 216
           +  C GC+ P +G CG
Sbjct: 98  KKSCQGCEMPSAGLCG 113


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 RNCCLGCQGPMSGPCG 216
           +  C GC+ P +G CG
Sbjct: 46  KKSCQGCEMPSAGLCG 61


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 RNCCLGCQGPMSGPCG 216
           +  C GC+ P +G CG
Sbjct: 229 KKSCQGCEMPSAGLCG 244


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 104 NCPSFRI*NQFEVNRRNWTC 163
           N P+F   N FEV R  W C
Sbjct: 31  NFPNFY--NDFEVQRYTWKC 48


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 44  FNQTFFYFIFLLYLSCC 94
           FN  F Y I L+   CC
Sbjct: 237 FNSLFGYQIILVIFDCC 253


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -3

Query: 420 PWTTARSAEPSSAASDTAVP---TAVVRAGYSS-TVAVHISAPPT 298
           PW  +    PS +++ +++P   T+     YSS +V    S+ PT
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPT 110


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 486 KKYTLFNFDSIHISFALHYLC 424
           K  +LF FD I +SF    LC
Sbjct: 141 KNASLFIFDLIFLSFRCTKLC 161


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 283 YCSNSCWRC 309
           +C+N+ WRC
Sbjct: 155 HCNNTTWRC 163


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 98  YRNCPSFRI*NQFEVNRRNWTCLYVIAVWVV 190
           Y N   F + +Q     + WT L ++  W V
Sbjct: 26  YYNFEKFSLEHQLWQKIQAWTYLILLTTWTV 56


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 58  KCLIEFCNVLVCF 20
           KCL  FC  LV F
Sbjct: 63  KCLAFFCTALVIF 75


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 58  KCLIEFCNVLVCF 20
           KCL  FC  LV F
Sbjct: 296 KCLAFFCTALVIF 308


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 58  KCLIEFCNVLVCF 20
           KCL  FC  LV F
Sbjct: 296 KCLAFFCTALVIF 308


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 459 SIHISFALHYLCAPW 415
           S H SF   +LC P+
Sbjct: 70  SAHFSFMSRFLCLPF 84


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 459 SIHISFALHYLCAPW 415
           S H SF   +LC P+
Sbjct: 26  SAHFSFMSRFLCLPF 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,421
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)