Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d10
         (532 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.4  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   8.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.4  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 342 ECRTLTKQLKRFLAIRKER 398
           ECR+L K+++R  AIR  R
Sbjct: 817 ECRSLLKRVQRKAAIRVAR 835


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 342 ECRTLTKQLKRFLAIRKERQRQIACGKLTDDRKYVSPRVD 461
           EC  LTK +     I    +++    ++ +D KYV+  +D
Sbjct: 618 ECPELTKAMDGVTYIADHTRKEEESSRVKEDWKYVAMVLD 657


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 93  EYNRDLHIFFEFKIKY 140
           E N D   FFEFK KY
Sbjct: 424 ENNNDRVTFFEFKDKY 439


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 301 AVSRSVRATSMTMENVERLQNNSNVFWLYAKNGRG 405
           AV +   A    +  ++ L   +NVF +   NG+G
Sbjct: 193 AVDKDEGAYGQVVYYIQGLSEENNVFSISTSNGKG 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,453
Number of Sequences: 2352
Number of extensions: 10216
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)