Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3d09
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015BCF80 Cluster: UPI00015BCF80 related cluster; n... 36 0.60
UniRef50_Q0N486 Cluster: ME-53; n=1; Clanis bilineata nucleopoly... 36 0.60
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q0AD11 Cluster: TrfA family protein; n=2; Proteobacteri... 35 1.4
UniRef50_Q0JMK9 Cluster: Os01g0388500 protein; n=1; Oryza sativa... 35 1.4
UniRef50_P40626 Cluster: High mobility group protein B; n=2; Tet... 35 1.4
UniRef50_Q7QS38 Cluster: GLP_661_336_2873; n=1; Giardia lamblia ... 34 1.8
UniRef50_Q19D01 Cluster: Putative uncharacterized protein; n=3; ... 33 3.2
UniRef50_Q9W159 Cluster: CG13582-PA; n=1; Drosophila melanogaste... 33 3.2
UniRef50_Q66B89 Cluster: Possible ThiF family; n=1; Yersinia pse... 33 4.2
UniRef50_A2Q5Z5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q24533 Cluster: SOX domain-containing protein dichaete;... 33 5.6
UniRef50_Q7WNX2 Cluster: Type III restriction enzyme; n=3; Bacte... 32 7.3
UniRef50_Q7VG77 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q4H2S3 Cluster: Transcription factor protein; n=2; Cion... 32 9.7
UniRef50_Q3S383 Cluster: Sox family protein 2; n=1; Nematostella... 32 9.7
UniRef50_Q3S381 Cluster: Sox family protein B1; n=1; Nematostell... 32 9.7
UniRef50_A7RXD8 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.7
UniRef50_A5K7G1 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
UniRef50_Q7SCQ2 Cluster: Putative uncharacterized protein NCU098... 32 9.7
>UniRef50_UPI00015BCF80 Cluster: UPI00015BCF80 related cluster; n=2;
unknown|Rep: UPI00015BCF80 UniRef100 entry - unknown
Length = 498
Score = 35.9 bits (79), Expect = 0.60
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 62 YTLKDIYADCAEIKRKKPYDHVNEEI--AKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDN 235
YT KDIY E P ++ I AK I E+ T+ + ++E++ K H
Sbjct: 42 YTDKDIYHLIREKFPSLPTRYIPSAINKAKSINKEHETIVFGNREIFEKLCKSHLQGKQR 101
Query: 236 ELLKCRWTQYKKH 274
E LK +W Q +K+
Sbjct: 102 EKLKEQWRQNRKY 114
>UniRef50_Q0N486 Cluster: ME-53; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: ME-53 - Clanis bilineata
nucleopolyhedrosis virus
Length = 389
Score = 35.9 bits (79), Expect = 0.60
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 65 TLKDIYADCAEI-KRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNEL 241
T+ ++Y +I + K P++H+ + + L TYEK LYEE F+ + H NE+
Sbjct: 198 TILNMYTSIRQIIETKAPHEHITKIV----------LRTYEKPLYEETFEECFINHLNEI 247
Query: 242 -LKCRWTQYKKHLEGRVFAPF-QFPDVRDLHFYN 337
K + TQ+ K + F + F +V ++N
Sbjct: 248 TFKPKETQFHKFAQTHKFINYTYFYEVYKREYHN 281
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 35.1 bits (77), Expect = 1.0
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Frame = +2
Query: 11 YALFVIFL*KYFYFYME---YTLKDIYADCAEIKRKKPYDHVNEEIAKRIGSEYRTLPTY 181
Y +F+IF+ + Y + Y L Y D + I + + ++ I R E + Y
Sbjct: 208 YVVFMIFMSSFLYLSVSSTIYLLSQNYIDPSPISSIRNLNIYHKFILNRTHYEIDLIKNY 267
Query: 182 EKGLYEEV--FKRHYSLHDNE------LLKCRWTQYKKHLEGRVFAPFQFPDVRDLHFYN 337
Y E+ FK+ LH N +LKC T+ KK++ + + P +D +
Sbjct: 268 HS--YNELNNFKKKLQLHKNPSFHDYPILKCI-TEQKKNISNDYLS--ELPYRKDNLYET 322
Query: 338 CAIRFLPSESIHRRTKYGFKLKPGPGVDDFGQM 436
I+ ESI R+T+ FK+ + ++ M
Sbjct: 323 TEIK----ESIQRKTENIFKMSTKKNIHEYNNM 351
>UniRef50_Q0AD11 Cluster: TrfA family protein; n=2;
Proteobacteria|Rep: TrfA family protein - Nitrosomonas
eutropha (strain C71)
Length = 322
Score = 34.7 bits (76), Expect = 1.4
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 59 EYTLKDIYADCAEIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEV--FKRHYSLHD 232
E+++KD+ D K + YD E I++ +E L T G E + + + +++D
Sbjct: 155 EFSIKDLVRDMGWPKNGRNYDRARECISRLKANEVLALNTKAYGKSEAISLIQNYTAIND 214
Query: 233 NELLKCRWTQYKKHLEGRVFAPF 301
NE C+ TQY+ ++ + F
Sbjct: 215 NE---CKPTQYRVWIDPNLIVLF 234
>UniRef50_Q0JMK9 Cluster: Os01g0388500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os01g0388500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 2196
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3
Query: 183 SYVGSVLYSLPILFAISSLT*SYGFFLLISAQSAYISFNV 64
+YVG +LY+ P LF + L S F+L+ A S YI FNV
Sbjct: 225 AYVGYILYAFPSLFEMHRLNGSLLVFILLWAASTYI-FNV 263
>UniRef50_P40626 Cluster: High mobility group protein B; n=2;
Tetrahymena thermophila|Rep: High mobility group protein
B - Tetrahymena thermophila
Length = 143
Score = 34.7 bits (76), Expect = 1.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 134 EIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHD--NELLKCRWTQYKKHLE 280
EI +I EY+ LP EK YEE +++ + +D N+ K ++ +K L+
Sbjct: 47 EIVSKISEEYKALPEKEKQKYEEAYRKEKATYDKQNDQWKEKYGDIEKSLK 97
>UniRef50_Q7QS38 Cluster: GLP_661_336_2873; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_336_2873 - Giardia lamblia ATCC
50803
Length = 845
Score = 34.3 bits (75), Expect = 1.8
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 122 HVNEEIAKRIGSEYRTLP-TYEKGLYEEVFKRHYSLHDNELLKCRWTQYKKHLEGRVFAP 298
H+ EI + S Y+ L TY K + F R SLH+ E LK + + KK +EG
Sbjct: 391 HITSEIPHYMMSAYQKLILTYHKAVQAVNFMR-ISLHNQEALKSKCSNKKKRIEGLDTVL 449
Query: 299 FQFPDVRDLHFYNCAIRFLPSESIHRRTKYG 391
F + C + S+H R +G
Sbjct: 450 FSTASIASQKTEACDEQPKGFLSLHGRAIFG 480
>UniRef50_Q19D01 Cluster: Putative uncharacterized protein; n=3;
unclassified T4-like viruses|Rep: Putative
uncharacterized protein - Aeromonas phage 25
Length = 82
Score = 33.5 bits (73), Expect = 3.2
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -2
Query: 412 RSGFQFKSIFGSAMY-RFGRQESNGAVVEVKISHVGKLEGRKHPTLQMFLVLCPSAFQQL 236
++ + ++ S M+ RF +++ A E I +G++ G+KHPT + + V P+ F+
Sbjct: 17 QTAMEIRNRLNSTMFLRFVKRKDYNARYEALIKSIGEMLGQKHPTAKTW-VAKPNPFRDG 75
Query: 235 VIVQ 224
V+V+
Sbjct: 76 VLVE 79
>UniRef50_Q9W159 Cluster: CG13582-PA; n=1; Drosophila
melanogaster|Rep: CG13582-PA - Drosophila melanogaster
(Fruit fly)
Length = 1556
Score = 33.5 bits (73), Expect = 3.2
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 155 SEYRTLPTYEKGLYEEVFKRHYSLHDNELLKCRWTQYKKHLEGRVFAPFQFPD 313
+ YR L T++ GLYE FKR + NEL+ R YK + + +++ F++ D
Sbjct: 497 NRYRAL-THQSGLYEFWFKRSF----NELVALRKIHYKVNGDHQIYRDFEWQD 544
>UniRef50_Q66B89 Cluster: Possible ThiF family; n=1; Yersinia
pseudotuberculosis|Rep: Possible ThiF family - Yersinia
pseudotuberculosis
Length = 577
Score = 33.1 bits (72), Expect = 4.2
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 98 IKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHY 220
++RK YD VN+EI + S RTLPTY F HY
Sbjct: 510 VQRKNRYD-VNDEILCEVLSFKRTLPTYLNAFLTSGFTLHY 549
>UniRef50_A2Q5Z5 Cluster: Putative uncharacterized protein; n=1;
Medicago truncatula|Rep: Putative uncharacterized
protein - Medicago truncatula (Barrel medic)
Length = 2005
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 183 SYVGSVLYSLPILFAISSLT*SYGFFLLISAQSAYISFNV 64
+YVG +LY+ P +F + L F+L+ A S YI FNV
Sbjct: 354 AYVGYILYAFPSMFRLQQLNGILLVFILLWAASTYI-FNV 392
>UniRef50_Q24533 Cluster: SOX domain-containing protein dichaete;
n=3; Diptera|Rep: SOX domain-containing protein dichaete
- Drosophila melanogaster (Fruit fly)
Length = 382
Score = 32.7 bits (71), Expect = 5.6
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 95 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 238
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 159 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205
>UniRef50_Q7WNX2 Cluster: Type III restriction enzyme; n=3;
Bacteria|Rep: Type III restriction enzyme - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 1028
Score = 32.3 bits (70), Expect = 7.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 182 EKGLYEEVFKRHYSLHDNELLKCRWTQYKKHLEG 283
EKG Y +F+ Y+ + NE+L T Y K+L+G
Sbjct: 444 EKGEYARIFEEEYTQYLNEMLDLDETAYVKYLKG 477
>UniRef50_Q7VG77 Cluster: Putative uncharacterized protein; n=1;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 108
Score = 32.3 bits (70), Expect = 7.3
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +2
Query: 128 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNELLKCRWTQYKKHLEGRVFAPFQF 307
++E ++IG + Y K L +E+F R + ++D +KC +K+ G V F
Sbjct: 3 SKETNRQIGPLDDKVGHYVKILCDEIFGREHFINDITRIKCNPKNFKRKAYGNVKDRILF 62
Query: 308 PDVRDLHFYNCAIRFLPSESIHRRTK 385
+ + +N + +H+R K
Sbjct: 63 YVKSNQYVWNEVYEEITKNDLHKRFK 88
>UniRef50_Q4H2S3 Cluster: Transcription factor protein; n=2; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 414
Score = 31.9 bits (69), Expect = 9.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 128 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 238
N EI+KR+G+E++TL +K + + KR +LH E
Sbjct: 123 NSEISKRLGAEWKTLSDSDKRPFIDEAKRLRALHMKE 159
>UniRef50_Q3S383 Cluster: Sox family protein 2; n=1; Nematostella
vectensis|Rep: Sox family protein 2 - Nematostella
vectensis
Length = 234
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 125 VNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 238
+N EI+KR+G E+ +L EK Y E KR LH +
Sbjct: 34 LNSEISKRLGLEWNSLTLDEKQPYVEEAKRLRELHKKD 71
>UniRef50_Q3S381 Cluster: Sox family protein B1; n=1; Nematostella
vectensis|Rep: Sox family protein B1 - Nematostella
vectensis
Length = 343
Score = 31.9 bits (69), Expect = 9.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 95 EIKRKKPYDHV---NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 238
E +RK D+ N EI+KR+GSE++ L EK Y + +R ++H E
Sbjct: 46 ERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQEKRPYIDEARRLRAVHMKE 96
>UniRef50_A7RXD8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 280
Score = 31.9 bits (69), Expect = 9.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 299 FQFPDVRDLHFYNCAIRFLPSESIHRRTKYGFKL 400
FQ P ++ L+ +C ++ LPS+ H RT G +L
Sbjct: 146 FQLPKLKQLYLNDCQLKTLPSDIGHLRTLEGLQL 179
>UniRef50_A5K7G1 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2039
Score = 31.9 bits (69), Expect = 9.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = -2
Query: 442 YGHLAKVVDARSGFQFKSIFGSAMYRFGRQESNGAVVEVKISHVGKLEGRKHPTLQMFLV 263
Y H+ K++ Q IF S+++ +GAV + +++ K RKHP L F +
Sbjct: 422 YIHMLKLLYENDELQ--EIFTSSLFFVFISAEDGAVRNMLLANFSKYHSRKHPLLSKFFI 479
Query: 262 LCPSAFQ 242
+ F+
Sbjct: 480 HLKNVFR 486
>UniRef50_Q7SCQ2 Cluster: Putative uncharacterized protein
NCU09815.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU09815.1 - Neurospora crassa
Length = 682
Score = 31.9 bits (69), Expect = 9.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 341 RSCRSEDLSRRETGRAQTPYPPNVSCTVSIGISAARY 231
+S S SR T +++ P+PP +SC ISA+R+
Sbjct: 344 KSKTSTSKSRSPTKKSRNPHPPGISCLPIAPISASRF 380
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,080,217
Number of Sequences: 1657284
Number of extensions: 9643875
Number of successful extensions: 27292
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 26579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27280
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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