Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d05
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   4.0  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 379 KDSRNRL*ICLYQKCV 332
           K  RNR   C YQKC+
Sbjct: 132 KRQRNRCQYCRYQKCL 147


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 354 IYSRFLESF*VSFIVLFYCCFIIDVRNFVFVL 449
           IY   +  F +  I  FYC FII   + +F+L
Sbjct: 133 IYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLL 164



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 396 VLFYCCFIIDVRNFVFVLY 452
           +LFYC FII   +F+   Y
Sbjct: 83  LLFYCPFIIFTVHFLLCTY 101


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 283 FINYTINTIDSLAVEEVHIFD 345
           F+  T NTI    V  +HIFD
Sbjct: 72  FVTKTGNTIPEGTVLHIHIFD 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,179
Number of Sequences: 336
Number of extensions: 3081
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)