Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d05
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069382-1|AAL39527.1|  540|Drosophila melanogaster LD08718p pro...    29   6.0  
AE014297-2754|AAF55738.2|  540|Drosophila melanogaster CG10889-P...    29   6.0  
BT016147-1|AAV37032.1|  555|Drosophila melanogaster AT22921p pro...    29   7.9  

>AY069382-1|AAL39527.1|  540|Drosophila melanogaster LD08718p
           protein.
          Length = 540

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = -3

Query: 643 TPLSPLTNDNIT*QITSHNFNKLNISIHITHTTLHYSYNLPLS----FIFFSLPKF--SH 482
           TP +P+T+  +   + +HNF  L+ S    +  LH S  LP       + + L      H
Sbjct: 452 TPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHASQQLPREEQRRLLRYHLGSLFPPH 511

Query: 481 FLHIFVQLF*YNTKTKFLTSII 416
            +H  +QL+   T  K + + I
Sbjct: 512 QVHAVLQLYPEETDAKTICAAI 533


>AE014297-2754|AAF55738.2|  540|Drosophila melanogaster CG10889-PA
           protein.
          Length = 540

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = -3

Query: 643 TPLSPLTNDNIT*QITSHNFNKLNISIHITHTTLHYSYNLPLS----FIFFSLPKF--SH 482
           TP +P+T+  +   + +HNF  L+ S    +  LH S  LP       + + L      H
Sbjct: 452 TPSAPVTDQGLGLPLPAHNFAHLSASDSRINEELHASQQLPREEQRRLLRYHLGSLFPPH 511

Query: 481 FLHIFVQLF*YNTKTKFLTSII 416
            +H  +QL+   T  K + + I
Sbjct: 512 QVHAVLQLYPEETDAKTICAAI 533


>BT016147-1|AAV37032.1|  555|Drosophila melanogaster AT22921p
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 598 TSHNFNKLNISIHITHTTLHYSYNLP 521
           T + F KL + +  THTTL Y  NLP
Sbjct: 236 TENGFPKLQLVLLNTHTTLDYVQNLP 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,264,351
Number of Sequences: 53049
Number of extensions: 454340
Number of successful extensions: 734
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)