Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3d02
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.45 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.45
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 283 LVLIVSFFYYYLVFIELCC 339
           L+L+V  +Y+Y + +  CC
Sbjct: 252 LLLLVCIYYFYYMHLLFCC 270



 Score = 21.0 bits (42), Expect = 4.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 289 LIVSFFYYYLVFIELCCW 342
           L+ ++++YY   I LC +
Sbjct: 97  LLCTYYFYYAFIILLCVY 114



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +1

Query: 283 LVLIVSFFYYYLVFIELCC 339
           L+ ++  +Y+Y   I L C
Sbjct: 279 LLFLLCIYYFYCALIILLC 297


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 88  CTTEDMSEAPKAAVTACIHSNLAT 159
           C TE  +E P   V  C   +L T
Sbjct: 519 CVTEGRAEGPLLVVEYCSRGDLQT 542


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 132 CLYSFQPCNP 161
           C  S QPCNP
Sbjct: 559 CEESLQPCNP 568


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 172 PPIVGLQGWN 143
           PPI G+  WN
Sbjct: 433 PPIGGMMNWN 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,604
Number of Sequences: 336
Number of extensions: 1390
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)