Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3c23
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 46 2e-05
11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166... 45 6e-05
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 44 1e-04
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 43 3e-04
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 42 7e-04
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 41 0.001
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 36 0.026
04_04_1601 + 34707975-34708209,34708598-34709970 36 0.045
03_02_0024 + 5079690-5081351 36 0.045
02_05_0242 + 27121152-27121316,27121404-27121515,27121616-271217... 35 0.059
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 35 0.078
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 34 0.10
04_04_1600 + 34704527-34704758,34705393-34706777 34 0.14
01_03_0126 + 12741397-12743022 33 0.18
11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989 33 0.31
11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747 33 0.31
07_03_0896 + 22373348-22374946 32 0.55
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 32 0.55
03_02_0023 + 5065962-5066079,5066179-5067614 31 0.96
12_01_0208 - 1567000-1567064,1567192-1567235,1567488-1567576,156... 31 1.3
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 30 1.7
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 30 1.7
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 30 1.7
07_03_0898 - 22403337-22404950 30 2.2
04_04_0593 - 26480036-26481438,26481915-26482083 30 2.2
02_05_1340 + 35797923-35799881 30 2.2
05_03_0358 - 12923593-12923638,12924195-12924319,12924407-129244... 29 3.9
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 29 5.1
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 29 5.1
11_04_0293 + 15926561-15928834 28 9.0
07_03_1045 + 23528768-23528879,23528979-23530399 28 9.0
01_06_0839 + 32340226-32340360,32340482-32340832,32341933-323420... 28 9.0
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/65 (33%), Positives = 41/65 (63%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G +G+ Y F + L+S I G ++D YGRKP+++I L I + L+ L+ ++ + + +R
Sbjct: 137 YAGFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLISIIIFNTLFGLSSSYWMALTSR 196
Query: 622 FIGGL 636
+ GL
Sbjct: 197 GLLGL 201
>11_01_0211 -
1660249-1660352,1660504-1660547,1660893-1660934,
1661010-1661098,1661181-1661225,1661501-1661545,
1661574-1661681,1661765-1661850,1662253-1662340,
1662884-1663084,1663491-1663566,1663652-1663701,
1663783-1663845,1663924-1663977,1664093-1664195,
1664328-1664430,1664516-1664576,1664872-1664912,
1666605-1666761
Length = 519
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/99 (24%), Positives = 49/99 (49%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G +G+ + F + LTS I G +D GRKP+++ + + + L+ L+ T+ + + R
Sbjct: 82 YAGFVGASFMFGRCLTSTIWGIAADRIGRKPVVVFGIFAVVIFNTLFGLSFTYWMAIATR 141
Query: 622 FIGGLSKANVSLCMAIVTDASTEKTRARGMALVGLAFSV 738
F+ G + A + + A ++LV A+ +
Sbjct: 142 FLLGALNGLLGPIKAYAIEVCRPEHEALALSLVSTAWGI 180
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/93 (24%), Positives = 50/93 (53%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G +G+ Y + +++ G +D YGRKP ++I + + + L+ L+ T+ + +V R
Sbjct: 85 YAGFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTTYWMAIVTR 144
Query: 622 FIGGLSKANVSLCMAIVTDASTEKTRARGMALV 720
+ GL + A ++ ++ +A G++LV
Sbjct: 145 GLLGLLCGILGPIKAYASEVCRKEHQALGISLV 177
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/99 (22%), Positives = 49/99 (49%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G LG+ Y + S + G ++D GRKP+++ + + + L+ L+ + + V R
Sbjct: 56 YAGFLGASYMIGRGFASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTR 115
Query: 622 FIGGLSKANVSLCMAIVTDASTEKTRARGMALVGLAFSV 738
F+ G ++ A + + +A G+++V A+ +
Sbjct: 116 FLLGALNGLLAPIKAYSIEVCRAEHQALGLSIVSTAWGI 154
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/93 (24%), Positives = 47/93 (50%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G + + Y + +S G +D YGRKP ++I + + + L+ L+ + + +V R
Sbjct: 38 YAGFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGLSTRYWMAIVTR 97
Query: 622 FIGGLSKANVSLCMAIVTDASTEKTRARGMALV 720
+ G+ + A T+ ++ +A GM+LV
Sbjct: 98 GMLGMLCGILGPIKAYATEICRKEHQALGMSLV 130
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/99 (21%), Positives = 48/99 (48%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G LG+ Y + S + G ++D GRKP+++ + + + L+ L+ + + V R
Sbjct: 66 YAGFLGASYMIGRGFASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTR 125
Query: 622 FIGGLSKANVSLCMAIVTDASTEKTRARGMALVGLAFSV 738
F+ G ++ A + + + G+++V A+ +
Sbjct: 126 FLLGALNGLLAPIKAYSIEVCRAEHQPLGLSIVSTAWGI 164
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 439 LFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVA 618
L+ G LG+ Y + S G ++D GRKP++ + + + L+ L+ + + +
Sbjct: 55 LYAGFLGASYMIGRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLFGLSVKYWMAIAT 114
Query: 619 RFIGG 633
RF+ G
Sbjct: 115 RFLLG 119
>04_04_1601 + 34707975-34708209,34708598-34709970
Length = 535
Score = 35.5 bits (78), Expect = 0.045
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +1
Query: 421 DRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETF 600
D +S + L SF+ L S G SDA GRK + + A A+ +LA +F
Sbjct: 93 DLHISEVQQEVLVGCLSFISLLGSLAAGRTSDAVGRKWTIGLAAAVFQAGAAVMTLAPSF 152
Query: 601 LIFVVARFIGGL 636
+ ++ R + G+
Sbjct: 153 AVLMMGRLLAGI 164
>03_02_0024 + 5079690-5081351
Length = 553
Score = 35.5 bits (78), Expect = 0.045
Identities = 31/114 (27%), Positives = 53/114 (46%)
Frame = +1
Query: 370 STLLQAVRSFQKLTGAPDRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLIC 549
S + A + +K D V VL G + ++YS + L + G SD GR+ +++
Sbjct: 76 SVMSGAQKFMKKDLNISDAKVEVLAG--IINIYSLVGSLAA---GRTSDWIGRRYTMVLA 130
Query: 550 LTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIVTDASTEKTRARGM 711
A + LA ++ I ++ RF+ G+ +L +A V A T ARG+
Sbjct: 131 SVIFFAGALIMGLAPSYAIVMLGRFVAGVG-VGYALMIAPVYTAEVAPTSARGL 183
>02_05_0242 +
27121152-27121316,27121404-27121515,27121616-27121728,
27122024-27122379,27122515-27122590,27122682-27122768,
27122885-27122965,27123060-27123092,27123335-27123388,
27123482-27123523,27123649-27123727,27123813-27123883,
27123958-27124047
Length = 452
Score = 35.1 bits (77), Expect = 0.059
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = +1
Query: 412 GAPDRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLA 591
G + V++ G ++ + +PIVG+LSD YGRK ++ + +T A L+ LA
Sbjct: 39 GRDECSVAIYLSGFQSAITGMGALVVTPIVGNLSDKYGRKALMTLPVT--VAILPLFILA 96
Query: 592 -----ETFLIFVVARFIGGLSKANVSLC--MAIVTDASTEKTRARGMALV 720
F ++ V + + G+ C +A V D + RA L+
Sbjct: 97 CNRSKVYFYVYYVVKVLAGIFCEGSMHCLLLAYVADQVGARRRAAAFGLL 146
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 34.7 bits (76), Expect = 0.078
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G LG+ Y + + G ++D GRKP+++ + + + L+ L+ + + + R
Sbjct: 41 YAGFLGASYMVGRSFAAIFWGVVADRIGRKPVIMFSILSVVIFNTLFGLSTKYWMALTTR 100
Query: 622 FIGG 633
F+ G
Sbjct: 101 FVLG 104
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 442 FGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVAR 621
+ G LG+ Y + + G ++D GRKP+++ + + + L+ L+ + + + R
Sbjct: 87 YAGFLGASYMVGRSFAAIFWGVVADRIGRKPVIVFSILSVVIFNTLFGLSTKYWMALTTR 146
Query: 622 FIGG 633
F+ G
Sbjct: 147 FVLG 150
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 469 SFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKAN 648
SF+ L S G SDA GRK + + A A+ +LA +F + +V R + G+
Sbjct: 108 SFISLLGSLAGGRTSDAVGRKWTIGLAAIVFQAGAAVMTLAPSFEVLMVGRLLAGVG-IG 166
Query: 649 VSLCMAIVTDASTEKTRARG 708
+ +A V A +RG
Sbjct: 167 FGVMIAPVYIAEISPAASRG 186
>01_03_0126 + 12741397-12743022
Length = 541
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 496 IVGSLSDAY-GRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANV-SLCMAI 669
++ +L+D + GR+ MLL+ L ++ + AL + + ++ RF+ G ++ V + M +
Sbjct: 142 LLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPNVWVYSALRFVSGFGRSMVGTSAMVL 201
Query: 670 VTDASTEKTRARGMALVGLAFSV 738
T+ ++ R A + FSV
Sbjct: 202 STELDGKRWRNTVSAAGFVFFSV 224
>11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989
Length = 476
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +1
Query: 457 GSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGL 636
GSM F+ ++ G +D GR+ L++ + A SL T+ + ARF+ +
Sbjct: 72 GSMNVFM-LVSILAAGWAADVLGRRGTLVLANAYLMAGALAMSLGATYAALMAARFVTSV 130
Query: 637 SKANVSLCMAIVTDASTEKTRARGM 711
SL +A V +A ARG+
Sbjct: 131 G-VGFSLVVAPVYNAEISPASARGV 154
>11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747
Length = 471
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +1
Query: 457 GSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGL 636
GSM F+ ++ G +D GR+ L++ + A SL T+ + ARF+ +
Sbjct: 75 GSMNVFM-LVSILAAGWAADVLGRRGTLVLANAFLMAGALAMSLGATYAALMAARFVTSV 133
Query: 637 SKANVSLCMAIVTDASTEKTRARGM 711
SL +A V +A ARG+
Sbjct: 134 G-VGFSLVVAPVYNAEISPASARGV 157
>07_03_0896 + 22373348-22374946
Length = 532
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 IVGSLSDAY-GRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIV 672
++ +L+D+ GR+ MLL+ L ++ + L + + + RF+ G ++ V C ++
Sbjct: 135 LLTTLADSLLGRRKMLLVSLASMSVAGVLTAFSPNVWAYAALRFVCGFGRSMVGTCALVL 194
Query: 673 TDASTEKTRARGMALVGLA 729
STE R V +A
Sbjct: 195 ---STELVGKRWRDTVSVA 210
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 496 IVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSL 657
I SL D GRK +L+ +G+AAS L SL+ T+ +A + G L+ A L
Sbjct: 359 IASSLMDKQGRKSLLITSFSGMAASMLLLSLSFTWK--ALAPYSGPLAVAGTVL 410
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +1
Query: 454 LGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGG 633
L + + S G SD GR+ +++ L LA + + RF+ G
Sbjct: 65 LAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFLMAGRFVAG 124
Query: 634 LSKANVSLCMAIVTDASTEKTRARG 708
+ +L +A V A T ARG
Sbjct: 125 IG-VGYALMIAPVYTAEVAPTSARG 148
>12_01_0208 -
1567000-1567064,1567192-1567235,1567488-1567576,
1568219-1568326,1568416-1568501,1568969-1569056,
1569171-1569344,1569844-1569919,1570003-1570052,
1570140-1570202,1570285-1570338,1570433-1570535,
1570615-1570666,1570849-1570909,1571034-1571074,
1571245-1571323
Length = 410
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/77 (18%), Positives = 37/77 (48%)
Frame = +1
Query: 508 LSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIVTDAST 687
++D GRKP++ + + + L+ L+ + + + RF+ G ++ A +
Sbjct: 61 VADRIGRKPIIEFSILSVVIFNTLFGLSVKYWMAIATRFLLGALNGMLAPIKAYSIEVCR 120
Query: 688 EKTRARGMALVGLAFSV 738
+ +A G+++V + +
Sbjct: 121 PEHQALGLSIVSTGWGI 137
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +1
Query: 412 GAPDRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLA 591
G D + VL G ++YS + L + G SD GR+ +++ A + SLA
Sbjct: 64 GVSDAQIEVLSGAI--NIYSLVGAL---LAGWTSDRLGRRLTIVLTNGFFLAGPLVMSLA 118
Query: 592 ETFLIFVVARFIGGLSKANVSLCMAIVTDASTEKTRARGM 711
+ + RF+ G+ +L +A V A +RG+
Sbjct: 119 GGYAALMAGRFVAGIG-VGYALVIAPVYAAEISPASSRGL 157
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 415 APDRFVSVLFG-GALGS-MYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSL 588
A + FVS F G LG+ + +Q + + L D GR+P+LLI +G+ + ++
Sbjct: 240 ASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAV 299
Query: 589 AETFLIFVVARFIG 630
+ +++ + IG
Sbjct: 300 SFYLKVYIASYSIG 313
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +1
Query: 502 GSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIVTDA 681
G+++D++GR+PML+ S + A + ++AR I G +++ + + +
Sbjct: 64 GAVADSFGRRPMLIASAVLYFVSGLVMLWAPNVYVLLLARLIDGFG-IGLAVTLVPLYIS 122
Query: 682 STEKTRARGM 711
T T RG+
Sbjct: 123 ETAPTDIRGL 132
>07_03_0898 - 22403337-22404950
Length = 537
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 496 IVGSLSDAY-GRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKANVSLCMAIV 672
++ +L+D + GR+ ML++ L ++ + L + + ++ RF+ G ++ V ++
Sbjct: 136 LLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVWVYAALRFVSGFGRSMVGTSAMVL 195
Query: 673 TDASTEKTRARGMALVG-LAFSV 738
+ K +++ G + FSV
Sbjct: 196 STELVGKWWRNTVSVAGFVLFSV 218
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 469 SFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKAN 648
S + L S G SDA GRK + + A A+ + A +F + ++ R + G+
Sbjct: 87 SVVSLLGSLSGGRTSDAIGRKWTMALGAIVFQAGAAIMTFAPSFTVLMIGRLLAGVGIGF 146
Query: 649 VSLCMAIVTDASTEKTRARG 708
++ A+ A ARG
Sbjct: 147 GAMVSAVYI-AEISPAAARG 165
>02_05_1340 + 35797923-35799881
Length = 652
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 502 GSLSDAYGRKPMLL--ICLTGIAASHALWSLAETFLIFVVARFIGGLS-KANVSLCMAIV 672
G LSD+ GR+PML+ L +A LWS I ++AR + G + V+L +
Sbjct: 65 GPLSDSRGRRPMLIASALLYSLAGLLMLWS--PNVPILLLARLVDGFAIGLAVTLVPVYI 122
Query: 673 TDASTEKTR 699
++ + TR
Sbjct: 123 SETAPPDTR 131
>05_03_0358 -
12923593-12923638,12924195-12924319,12924407-12924469,
12925371-12925495,12925596-12925653,12925830-12926073,
12926162-12926223,12926665-12926721
Length = 259
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 376 LLQAVRSFQKLTGA--PDRFVSVLFGGALGSMYSF---LQFLTSPIVGSLSDAYGRKPML 540
+L ++ +F + A P VLF GAL ++ F+TS I G L GRK
Sbjct: 183 ILTSLETFDYIVVACLPGISEEVLFRGALMPIFGLNWISAFVTSAIFGILHLGNGRKYSF 242
Query: 541 LICLTGIAA 567
IC GI +
Sbjct: 243 AICCAGIVS 251
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 496 IVGSLSDAYGRKPMLLI 546
++G L+D YGRKP+LL+
Sbjct: 782 LMGQLADEYGRKPLLLL 798
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 483 ELKKTIHGAQRTPKQDRHESIWCP 412
+L+ G +R P+ DRH +W P
Sbjct: 246 DLELQARGGRRPPRADRHREVWVP 269
>11_04_0293 + 15926561-15928834
Length = 757
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 502 GSLSDAYGRKPMLLICLTGIAASHALWSLAETFLIFVVARFIGGLSKA-NVSLCMAIVTD 678
G +SD GR+PML+ A + + + ++AR + G V+L +++
Sbjct: 64 GPVSDLVGRRPMLIASSLLYFAGGLIMLWSPNVYVLLLARLVDGFGVGLAVTLVPVYISE 123
Query: 679 ASTEKTRAR 705
S + R R
Sbjct: 124 TSPPEIRGR 132
>07_03_1045 + 23528768-23528879,23528979-23530399
Length = 510
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/96 (26%), Positives = 40/96 (41%)
Frame = +1
Query: 421 DRFVSVLFGGALGSMYSFLQFLTSPIVGSLSDAYGRKPMLLICLTGIAASHALWSLAETF 600
D V VL G + ++YS + + G SD GR+ ++ A L A +
Sbjct: 57 DGKVEVLMG--ILNLYSLIGSFAA---GRTSDWIGRRYTIVFAAVIFFAGAFLMGFAVNY 111
Query: 601 LIFVVARFIGGLSKANVSLCMAIVTDASTEKTRARG 708
+ + RF+ G+ +L +A V A ARG
Sbjct: 112 AMLMFGRFVAGIG-VGYALMIAPVYTAEVSPASARG 146
>01_06_0839 +
32340226-32340360,32340482-32340832,32341933-32342013,
32342368-32343150
Length = 449
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 713 AIPLALVFSVEASVTMAMHRLTLALLNPPMNRATTNIRNVSAK 585
A+PLAL+ +V +S + + A PP+ +A +++R K
Sbjct: 11 ALPLALLLAVGSSPGLVRQASSSAAAKPPVPKAISDLREAIVK 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,972,094
Number of Sequences: 37544
Number of extensions: 412401
Number of successful extensions: 970
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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