Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c22
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 75  FAESSLKFCINHFKMY 28
           F  SSL+FC+N   ++
Sbjct: 312 FRPSSLRFCLNILSIF 327


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 75 FAESSLKFCINHFKMY 28
          F  SSL+FC+N   ++
Sbjct: 37 FRPSSLRFCLNILSIF 52


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 20  KFLYILKWLMQNFSELSANAHLINFQNSK*RKRTKI*IYY 139
           KF+  +  L++   +L   + +IN++N + R R  + + Y
Sbjct: 101 KFIEFINKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRY 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,240
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)