Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3c20
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 295 1e-79
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 295 1e-79
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 263 3e-70
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 132 1e-30
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 132 1e-30
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 132 1e-30
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 132 1e-30
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 132 1e-30
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 132 1e-30
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 130 6e-30
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 63 7e-10
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 63 7e-10
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 63 7e-10
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 63 7e-10
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 63 7e-10
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 63 7e-10
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 62 1e-09
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 62 2e-09
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 58 4e-08
AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN... 56 9e-08
AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN... 56 9e-08
AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein. 56 9e-08
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 52 1e-06
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 52 1e-06
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 52 1e-06
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 52 1e-06
BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein pr... 50 1e-05
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 44 5e-04
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 44 5e-04
BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-li... 44 6e-04
AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1 f... 44 6e-04
AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1 f... 44 6e-04
AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1 f... 44 6e-04
AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein. 44 6e-04
AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein. 44 6e-04
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 41 0.005
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 40 0.010
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 40 0.010
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 40 0.010
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 40 0.010
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 40 0.010
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 40 0.010
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 40 0.010
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 39 0.014
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 39 0.014
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 39 0.014
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 39 0.014
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 39 0.014
AB209220-1|BAD92457.1| 163|Homo sapiens 26S proteasome-associat... 36 0.13
AC009487-1|AAY15016.1| 156|Homo sapiens unknown protein. 36 0.17
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 32 2.1
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.9
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 31 4.9
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 31 4.9
L36983-1|AAA88025.1| 866|Homo sapiens dynamin protein. 30 8.5
BC054501-1|AAH54501.1| 866|Homo sapiens dynamin 2 protein. 30 8.5
BC039596-1|AAH39596.1| 870|Homo sapiens dynamin 2 protein. 30 8.5
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 30 8.5
AK127033-1|BAC86797.1| 399|Homo sapiens protein ( Homo sapiens ... 30 8.5
AK097875-1|BAC05190.1| 464|Homo sapiens protein ( Homo sapiens ... 30 8.5
AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens ... 30 8.5
AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial prote... 30 8.5
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 30 8.5
AC007229-2|AAD23603.1| 393|Homo sapiens dynamin II {AA 474- 866... 30 8.5
AC007229-1|AAD23604.1| 397|Homo sapiens DYN2_HUMAN [AA 474- 870... 30 8.5
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 295 bits (723), Expect = 1e-79
Identities = 141/143 (98%), Positives = 143/143 (100%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQ+GTGVSVEAVD
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI
Sbjct: 89 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148
Query: 594 QSVKGKVVIDAFRLINSNMMVLG 662
QSVKGKVVIDAFRLIN+NMMVLG
Sbjct: 149 QSVKGKVVIDAFRLINANMMVLG 171
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 295 bits (723), Expect = 1e-79
Identities = 141/143 (98%), Positives = 143/143 (100%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQ+GTGVSVEAVD
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI
Sbjct: 89 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148
Query: 594 QSVKGKVVIDAFRLINSNMMVLG 662
QSVKGKVVIDAFRLIN+NMMVLG
Sbjct: 149 QSVKGKVVIDAFRLINANMMVLG 171
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 263 bits (645), Expect = 3e-70
Identities = 125/126 (99%), Positives = 126/126 (100%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQ+GTGVSVEAVD
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI
Sbjct: 89 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148
Query: 594 QSVKGK 611
QSVKGK
Sbjct: 149 QSVKGK 154
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 132 bits (318), Expect = 1e-30
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 26 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 84
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 85 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 144
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 145 ISAGKVNLGAFR 156
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 130 bits (313), Expect = 6e-30
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
Frame = +3
Query: 246 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 425
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 426 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
A ++ KQ G E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGHLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 600 VK-GKVVIDAFR 632
+ GKV + AFR
Sbjct: 176 ISAGKVNLGAFR 187
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V+D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 62.5 bits (145), Expect = 1e-09
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE V + V + ++ +
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGEVDAVRIVHIHSVIILRRSDKRKDRVEIS 69
Query: 414 P----VFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 581
P + + + TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 70 PEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 129
Query: 582 ----VDPIQSVKGKVVIDAFRLINS 644
++ + G+V+ F+ I +
Sbjct: 130 FSCFIEDKNTKTGRVLYTCFQSIQA 154
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 62.1 bits (144), Expect = 2e-09
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEA 407
+QV I L +LK++KH + G EV+ G++LG V D + + + F PQ T +
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKD-RLEITNCFPFPQH-TEDDADF 94
Query: 408 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
+ +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ D
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYD 153
Query: 588 PIQSVKGKVVIDAFRLINSNMMV 656
PI++ +G + + A+RL M V
Sbjct: 154 PIKTAQGSLSLKAYRLTPKLMEV 176
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 57.6 bits (133), Expect = 4e-08
Identities = 38/141 (26%), Positives = 73/141 (51%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+QV I L + K + G + V G++LG V+D + + + F PQ T + +
Sbjct: 37 KQVQIDGLVVFKHYQEEGQGTEV-VQGVLLGLVVED-RLEITNCFPFPQH-TEDDADFDE 93
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
+Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V ++ DPI
Sbjct: 94 VQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPI 152
Query: 594 QSVKGKVVIDAFRLINSNMMV 656
++ +G + + A+RL M V
Sbjct: 153 KTAQGSLSLKAYRLTPKLMEV 173
>AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 56.4 bits (130), Expect = 9e-08
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 237 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVIDVFAMPQTGTGVSVEAVD 413
QV ++S ALL M H + EV+GL+ G + + D V V TG+ E +D
Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 633
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PV Q + + L G V+GWYHSHP F S DI+TQ +++ R A + I
Sbjct: 634 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 691
Query: 594 QS 599
S
Sbjct: 692 VS 693
>AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 56.4 bits (130), Expect = 9e-08
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 237 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVIDVFAMPQTGTGVSVEAVD 413
QV ++S ALL M H + EV+GL+ G + + D V V TG+ E +D
Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 633
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PV Q + + L G V+GWYHSHP F S DI+TQ +++ R A + I
Sbjct: 634 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 691
Query: 594 QS 599
S
Sbjct: 692 VS 693
>AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein.
Length = 726
Score = 56.4 bits (130), Expect = 9e-08
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 237 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVIDVFAMPQTGTGVSVEAVD 413
QV ++S ALL M H + EV+GL+ G + + D V V TG+ E +D
Sbjct: 474 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 531
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PV Q + + L G V+GWYHSHP F S DI+TQ +++ R A + I
Sbjct: 532 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 589
Query: 594 QS 599
S
Sbjct: 590 VS 591
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 67 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 126
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 127 TCFQSIQA 134
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 116 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 175
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 176 TCFQSIQA 183
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 15 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 72
Query: 414 PV 419
V
Sbjct: 73 AV 74
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 112 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 171
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 172 TCFQSIQA 179
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD T R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD-TSRSDSKFAYTGTEMRTVAEKVD 68
Query: 414 PV 419
V
Sbjct: 69 AV 70
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 112 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 171
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 172 TCFQSIQA 179
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD T R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD-TSRSDSKFAYTGTEMRTVAEKVD 68
Query: 414 PV 419
V
Sbjct: 69 AV 70
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPIQSVKGKVVI 620
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++ ++ + G+V+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170
Query: 621 DAFRLINS 644
F+ I +
Sbjct: 171 TCFQSIQA 178
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+ V++ S A L L H + EVMGL +GE DD R FA T E VD
Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTVAEKVD 67
Query: 414 PV 419
V
Sbjct: 68 AV 69
>BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein
protein.
Length = 234
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 303 EVMGLMLGEFVD-DYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVG 479
EV+GL+ G + + D V V TG+ E +DPV Q + + L G V+G
Sbjct: 3 EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIG 59
Query: 480 WYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 599
WYHSHP F S DI+TQ +++ R A + I S
Sbjct: 60 WYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVS 99
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +3
Query: 234 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QTGTGV 395
++V + L LL ++ H G+ G V+G++LG + + V + FA+P +
Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSW-QKKVLDVSNSFAVPFDEDDKDD 65
Query: 396 SVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVA 575
SV +D + M M K+ E +VGWYH+ P L DI + + +V
Sbjct: 66 SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVL 121
Query: 576 VVVD 587
V++D
Sbjct: 122 VIID 125
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +3
Query: 234 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QTGTGV 395
++V + L LL ++ H G+ G V+G++LG + + V + FA+P +
Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSW-QKKVLDVSNSFAVPFDEDDKDD 65
Query: 396 SVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVA 575
SV +D + M M K+ E +VGWYH+ P L DI + + +V
Sbjct: 66 SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVL 121
Query: 576 VVVD 587
V++D
Sbjct: 122 VIID 125
>BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-like
1 protein.
Length = 436
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 341 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 395
Query: 648 MM 653
M+
Sbjct: 396 ML 397
>AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 175 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 229
Query: 648 MM 653
M+
Sbjct: 230 ML 231
>AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 461
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 341 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 395
Query: 648 MM 653
M+
Sbjct: 396 ML 397
>AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 436
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 341 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 395
Query: 648 MM 653
M+
Sbjct: 396 ML 397
>AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein.
Length = 463
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 343 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 397
Query: 648 MM 653
M+
Sbjct: 398 ML 399
>AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein.
Length = 436
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINSN 647
+ +GW H+HP +LS VD++T S++ + A+A+V P G FRL N+
Sbjct: 341 LTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTNAG 395
Query: 648 MM 653
M+
Sbjct: 396 ML 397
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 40.7 bits (91), Expect = 0.005
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDV---FAMP--QTGTGVS 398
++V + L LL ++ H V + ++G + + +V+DV FA+P + S
Sbjct: 7 QKVVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDS 66
Query: 399 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 578
V +D + M M K+ E +VGWYH+ P L DI + + +V V
Sbjct: 67 VWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLV 122
Query: 579 VVD 587
++D
Sbjct: 123 IID 125
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +3
Query: 453 TGRPEMVVGWYHSHPGFGCWLSGV 524
TGRP VVGWYHSHP W S V
Sbjct: 53 TGRPMRVVGWYHSHPHITVWPSHV 76
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 468 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 590
+ +GW H+HP +LS VD++T S++ + +VA+V P
Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 306 VMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWY 485
V+G +LG VD ++V V + F++P + V AVD F M ++ K+ E+++GWY
Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 306 VMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWY 485
V+G +LG VD ++V V + F++P + V AVD F M ++ K+ E+++GWY
Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 306 VMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWY 485
V+G +LG VD ++V V + F++P + V AVD F M ++ K+ E+++GWY
Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 306 VMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWY 485
V+G +LG VD ++V V + F++P + V AVD F M ++ K+ E+++GWY
Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 306 VMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWY 485
V+G +LG VD ++V V + F++P + V AVD F M ++ K+ E+++GWY
Sbjct: 109 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 166
>AB209220-1|BAD92457.1| 163|Homo sapiens 26S proteasome-associated
pad1 homolog variant protein.
Length = 163
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 609 KVVIDAFRLINSNMMVLG 662
+VVIDAFRLIN+NMMVLG
Sbjct: 7 QVVIDAFRLINANMMVLG 24
>AC009487-1|AAY15016.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 612 VVIDAFRLINSNMMVLG 662
VVIDAFRLIN+NMMVLG
Sbjct: 1 VVIDAFRLINANMMVLG 17
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/108 (24%), Positives = 37/108 (34%)
Frame = -2
Query: 622 SITTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFN 443
S T+ P T + TT+T + S T + P T + P+
Sbjct: 63 STTSSPTTSTTSAPTTSTTSASTTSTTSGA--GTTPSPVPTTSTTSAPTTRTTSAPISST 120
Query: 442 MSNILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSI 299
S T +T +PVP + T T +PS P TSI
Sbjct: 121 TSATTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSI 168
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.7 bits (66), Expect = 4.9
Identities = 29/113 (25%), Positives = 45/113 (39%)
Frame = -2
Query: 625 ASITTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCF 446
A+ ++ P T W+ + T TA + ++ L STP T I P
Sbjct: 240 ATPSSTPGTTWILTELTTTATTTASTGSTATLSSTPGT------------TWILTEPSTT 287
Query: 445 NMSNILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPA 287
+ T + +ST ++ T+ T TV SS +PS P T+ PA
Sbjct: 288 ATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPA 340
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 30.7 bits (66), Expect = 4.9
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = -2
Query: 586 STTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMSNILAWKTGST 407
S TT T A+N S+ + P P E T + P+ ++ T ST
Sbjct: 213 SMTTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTFSNSDTSST 272
Query: 406 ASTDT--PVPVCGIANTSITRTV*SSTNSPSMRPITSI 299
+++T P + S TRT S+ + ++ +TS+
Sbjct: 273 PTSETTYPTSLTSALTDSTTRTTYSTNMTGTLSTVTSL 310
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 30.7 bits (66), Expect = 4.9
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = -2
Query: 586 STTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMSNILAWKTGST 407
S TT T A+N S+ + P P E T + P+ ++ T ST
Sbjct: 247 SMTTTTPLGPTATNTLPSFTSSVSSSTPVPSTEAITSGTTNTTPLSTLVTTFSNSDTSST 306
Query: 406 ASTDT--PVPVCGIANTSITRTV*SSTNSPSMRPITSI 299
+++T P + S TRT S+ + ++ +TS+
Sbjct: 307 PTSETTYPTSLTSALTDSTTRTTYSTNMTGTLSTVTSL 344
>L36983-1|AAA88025.1| 866|Homo sapiens dynamin protein.
Length = 866
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 730 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 777
>BC054501-1|AAH54501.1| 866|Homo sapiens dynamin 2 protein.
Length = 866
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 730 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 777
>BC039596-1|AAH39596.1| 870|Homo sapiens dynamin 2 protein.
Length = 870
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 734 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 781
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 471 VVGWYHSHPGFGCWLSGVDINTQQSFE 551
+VGWYHSHP S DI+ Q ++
Sbjct: 344 LVGWYHSHPHSPALPSLQDIDAQMDYQ 370
>AK127033-1|BAC86797.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ45089 fis, clone BRAWH3029385, highly similar
to Dynamin 2 (EC 3.6.1.50). ).
Length = 399
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 341 NIIGDISTSTVSTPVPPPV----DDTWLQSASSRSPTPQRRPVSSIHPPGRP 388
>AK097875-1|BAC05190.1| 464|Homo sapiens protein ( Homo sapiens
cDNA FLJ40556 fis, clone THYMU2002583, highly similar to
DYNAMIN 2. ).
Length = 464
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 328 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 375
>AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens
cDNA FLJ14981 fis, clone Y79AA1000202. ).
Length = 451
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 471 VVGWYHSHPGFGCWLSGVDINTQQSFE 551
+VGWYHSHP S DI+ Q ++
Sbjct: 294 LVGWYHSHPHSPALPSLQDIDAQMDYQ 320
>AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial protein
protein.
Length = 448
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 471 VVGWYHSHPGFGCWLSGVDINTQQSFE 551
+VGWYHSHP S DI+ Q ++
Sbjct: 291 LVGWYHSHPHSPALPSLQDIDAQMDYQ 317
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 471 VVGWYHSHPGFGCWLSGVDINTQQSFE 551
+VGWYHSHP S DI+ Q ++
Sbjct: 341 LVGWYHSHPHSPALPSLQDIDAQMDYQ 367
>AC007229-2|AAD23603.1| 393|Homo sapiens dynamin II {AA 474- 866]
[Homo sapiens] protein.
Length = 393
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 257 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 304
>AC007229-1|AAD23604.1| 397|Homo sapiens DYN2_HUMAN [AA 474- 870]
protein.
Length = 397
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 436 NILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
NI+ + ST ST P PV + + ++ S + +P RP++SI P RP
Sbjct: 261 NIIGDISTSTVSTPVPPPV----DDTWLQSASSHSPTPQRRPVSSIHPPGRP 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,452,466
Number of Sequences: 237096
Number of extensions: 2122961
Number of successful extensions: 5327
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 5120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5313
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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