Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3c20
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome re... 277 4e-75
U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical pr... 229 2e-60
U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signaloso... 124 6e-29
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 40 0.001
AF003740-3|AAC48137.2| 365|Caenorhabditis elegans Eukaryotic in... 40 0.002
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 35 0.059
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 29 2.9
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 29 2.9
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 3.9
AF022974-2|AAC48038.1| 344|Caenorhabditis elegans Seven tm rece... 28 5.1
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 28 6.8
U80838-4|AAT48616.1| 648|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical... 28 6.8
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 28 6.8
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 9.0
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 11 protein.
Length = 312
Score = 277 bits (680), Expect = 4e-75
Identities = 133/142 (93%), Positives = 135/142 (95%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
E VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTV VIDVFAMPQ+GTGVSVEAVD
Sbjct: 31 ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVD 90
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS+RAVAVVVDPI
Sbjct: 91 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPI 150
Query: 594 QSVKGKVVIDAFRLINSNMMVL 659
QSVKGKVVIDAFR IN M L
Sbjct: 151 QSVKGKVVIDAFRTINPQSMAL 172
>U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical
protein F37A4.5 protein.
Length = 319
Score = 229 bits (559), Expect = 2e-60
Identities = 104/136 (76%), Positives = 120/136 (88%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
E V ISSLALLKML+H R+G+P+EVMGLMLG+FVDDYT+ V DVFAMPQ+GT V+VE+VD
Sbjct: 27 ETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVD 86
Query: 414 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
PV+Q K +D+LK GR E VVGWYHSHPGFGCWLS VD+NTQQSFEAL RAVAVVVDPI
Sbjct: 87 PVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPI 146
Query: 594 QSVKGKVVIDAFRLIN 641
QSVKGKV++DAFR +N
Sbjct: 147 QSVKGKVMLDAFRSVN 162
>U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signalosome
subunit protein 5 protein.
Length = 368
Score = 124 bits (299), Expect = 6e-29
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Frame = +3
Query: 234 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 413
+Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V A
Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112
Query: 414 PVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 587
++ + +M GR E VVGWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 588 PIQSVK-GKVVIDAFR 632
P++++ GKV I AFR
Sbjct: 173 PLRTMSAGKVDIGAFR 188
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Frame = +3
Query: 237 QVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QTGTGVS 398
+V + L LL ++ H + V+G++LG D T+ + + FA+P + S
Sbjct: 40 KVTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKS 99
Query: 399 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 578
+D + M M + E +VGWYH+ P L DI + + V V
Sbjct: 100 TWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPK----LHKNDIAINEQLKRFCPNPVLV 155
Query: 579 VVD 587
++D
Sbjct: 156 IID 158
>AF003740-3|AAC48137.2| 365|Caenorhabditis elegans Eukaryotic
initiation factor protein3.H protein.
Length = 365
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 423 QAKMLDMLKQTGRPEM---VVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 593
Q +MLDML++ + +VG+Y SH FG S + + ++A+ V ++ DPI
Sbjct: 90 QHEMLDMLRKFRTMNIDYEIVGFYQSHQ-FGAGFSHDLVESMFDYQAMGPENVVLIYDPI 148
Query: 594 QSVKGKVVIDAFRL 635
++ +G++ + A+RL
Sbjct: 149 KTRQGQLSLRAWRL 162
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 34.7 bits (76), Expect = 0.059
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 1/128 (0%)
Frame = -2
Query: 661 PSTIIFELIRRNASITTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*Y 482
P+T E + TT P T TTT T + + +TP P
Sbjct: 143 PTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT-TTTTTPTTTTTAPTTTTT 201
Query: 481 HPTTISGRPVCFNMSNILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTN-SPSMRPIT 305
PTT + P T +T +T T P + T T ++T+ + + P T
Sbjct: 202 TPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTT 261
Query: 304 SIGTPARP 281
+ T +P
Sbjct: 262 TTQTTTKP 269
Score = 30.7 bits (66), Expect = 0.96
Identities = 30/124 (24%), Positives = 45/124 (36%)
Frame = -2
Query: 661 PSTIIFELIRRNASITTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*Y 482
P+T TT P T +TTT T + + +TP P
Sbjct: 125 PTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTT----TTPTTTTTTPTTTTT 180
Query: 481 HPTTISGRPVCFNMSNILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITS 302
PTT + P + T +T +T TP + T T T ++T + + P T+
Sbjct: 181 TPTTTTTTPTTTTTAPTTTTTTPTTTTT-TPTTTTTVPTT--TTTTPTTTTTTTTTPTTT 237
Query: 301 IGTP 290
TP
Sbjct: 238 TTTP 241
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/110 (24%), Positives = 37/110 (33%), Gaps = 1/110 (0%)
Frame = -2
Query: 616 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 437
TT P T TTT T + + +TP P PTT + P +
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPT-TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTT 230
Query: 436 NILAWKTGST-ASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTP 290
T +T +T TP T+ T +T P+ T TP
Sbjct: 231 TTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTP 280
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Frame = -2
Query: 616 TTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*YHPTTISGRPVCFNMS 437
TT P T TTT T + + +TP P PTT + P +
Sbjct: 122 TTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTT 181
Query: 436 NILAWKTGSTA----STDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTP 290
T +T +T T P + T TV ++T + T+ TP
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTP 234
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 470 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 291
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1345 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1403
Query: 290 STS 282
S
Sbjct: 1404 DQS 1406
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 470 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 291
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 126 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 184
Query: 290 STS 282
S
Sbjct: 185 DQS 187
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 470 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 291
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1345 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1403
Query: 290 STS 282
S
Sbjct: 1404 DQS 1406
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 470 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 291
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 126 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 184
Query: 290 STS 282
S
Sbjct: 185 DQS 187
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 470 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 291
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1348 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1406
Query: 290 STS 282
S
Sbjct: 1407 DQS 1409
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 406 ASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARPC 278
A +DT +PVC +AN + T SS + I G + C
Sbjct: 1746 AESDTCLPVCSVANVCSSGTCVSSNTTAGYECICPAGKTGKNC 1788
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 406 ASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARPC 278
A +DT +PVC +AN + T SS + I G + C
Sbjct: 1746 AESDTCLPVCSVANVCSSGTCVSSNTTAGYECICPAGKTGKNC 1788
>AF022974-2|AAC48038.1| 344|Caenorhabditis elegans Seven tm
receptor protein 209 protein.
Length = 344
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 514 YLVWISTLNSHLKHYRNVQ*LLWLIPS 594
Y W + N HLK + ++ LW +PS
Sbjct: 113 YRYWAVSGNKHLKEFEGLRIFLWTLPS 139
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical
protein R10E8.6 protein.
Length = 1696
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 485 IPSNNHFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSE 321
IPSN+ C +H + D+I S+ Y PG + I+ + + +L +
Sbjct: 480 IPSNSLKADGCCISFNRHPLITDYITSVLSYFQPGTLENIAIHTAPHTIAMELED 534
>U80838-4|AAT48616.1| 648|Caenorhabditis elegans Hypothetical
protein F47F6.5 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 419 DWINSLYRYSSPGLWHSKYINN 354
DWI+ +YR+ P YINN
Sbjct: 447 DWIDEVYRFERPSRVFCHYINN 468
>AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical
protein H04M03.12 protein.
Length = 260
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -1
Query: 473 NHFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRN 294
NH + + V+ L S+YRYS P + + I KL +H+TH
Sbjct: 86 NHLKNDSRVRRVKWRHLSSERVSIYRYSLPAITYEMSFIKFIIQEISKL-QHQTHFFLYK 144
Query: 293 ASTSMFQHFKEC 258
+ +H K C
Sbjct: 145 QNLLFLKHAKNC 156
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 418 TGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGT 293
+ +TAST TP P+ T+ T T ++T P+ T I T
Sbjct: 79 SSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPT 120
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 661 PSTIIFELIRRNASITTLPFTDWMGSTTTATARSDNASNDC*VLISTPDNQQPKPGCE*Y 482
PST + +TLP T+ G +TT++A + + VL N++P+P + +
Sbjct: 1336 PSTEVTSPEGSGTEESTLPPTEGSGESTTSSAPTVEPAT---VLPPQNRNEKPEPTKDTF 1392
Query: 481 H-PTTISGRP 455
PTT +G P
Sbjct: 1393 ALPTTTTGAP 1402
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -2
Query: 424 WKTGSTAST--DTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 281
W T T ST TP I +T T T ST + P T TP P
Sbjct: 149 WATKPTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,936,256
Number of Sequences: 27780
Number of extensions: 317094
Number of successful extensions: 890
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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