Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c18
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +1

Query: 367 REKVYSFIK-IPQELEKFMAYGFFQCADSLLFVYTFLPLRFLIAFWSFCN 513
           ++++Y F   + Q L KF A  FF    S +         FLI    F N
Sbjct: 303 KQELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLIIIVQFRN 352


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 496 FWSFCNRLFRNCFGFS 543
           +W FC R   NC  F+
Sbjct: 60  WWEFCQRNGHNCLDFT 75


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 343 DEERFSARREKVYSFIKIPQELEKFMAYGFFQCADSLLF 459
           D ++   R E + S +K+ Q   +  A  FF   ++LLF
Sbjct: 330 DIDKEDERNEVISSALKLSQNELEITACKFFSIDNALLF 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,820
Number of Sequences: 336
Number of extensions: 3218
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)