Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c18
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066899-1|AAH66899.1|  567|Homo sapiens TAPT1 protein protein.       159   1e-38
AK074494-1|BAC11022.1|  562|Homo sapiens protein ( Homo sapiens ...   159   1e-38
AF189251-1|AAF28308.1|  345|Homo sapiens cytomegalovirus partial...    82   2e-15

>BC066899-1|AAH66899.1|  567|Homo sapiens TAPT1 protein protein.
          Length = 567

 Score =  159 bits (385), Expect = 1e-38
 Identities = 72/142 (50%), Positives = 101/142 (71%)
 Frame = +1

Query: 289 SLFAFLHVELTRGYLLEHDEERFSARREKVYSFIKIPQELEKFMAYGFFQCADSLLFVYT 468
           SL  FL  ELTRGY LEH+E +++ RRE+VY+ ++IP+ELEK M +G F C D+ L+V+T
Sbjct: 69  SLLRFLSAELTRGYFLEHNEAKYTERRERVYTCLRIPRELEKLMVFGIFLCLDAFLYVFT 128

Query: 469 FLPLRFLIAFWSFCNRLFRNCFGFSSHYSKSILKPAETCDVLKGFILLVCSILMCYIDTN 648
            LPLR  +A +     L   C+G      + +L+PA+ CD+LKG IL++C  +M Y+D +
Sbjct: 129 LLPLRVFLALFRL---LTLPCYGLR---DRRLLQPAQVCDILKGVILVICYFMMHYVDYS 182

Query: 649 MMYHLVKSQSVMKLYIFYNMLE 714
           MMYHL++ QSV+KLYI YNMLE
Sbjct: 183 MMYHLIRGQSVIKLYIIYNMLE 204


>AK074494-1|BAC11022.1|  562|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90013 fis, clone HEMBA1000477. ).
          Length = 562

 Score =  159 bits (385), Expect = 1e-38
 Identities = 72/142 (50%), Positives = 101/142 (71%)
 Frame = +1

Query: 289 SLFAFLHVELTRGYLLEHDEERFSARREKVYSFIKIPQELEKFMAYGFFQCADSLLFVYT 468
           SL  FL  ELTRGY LEH+E +++ RRE+VY+ ++IP+ELEK M +G F C D+ L+V+T
Sbjct: 69  SLLRFLSAELTRGYFLEHNEAKYTERRERVYTCLRIPRELEKLMVFGIFLCLDAFLYVFT 128

Query: 469 FLPLRFLIAFWSFCNRLFRNCFGFSSHYSKSILKPAETCDVLKGFILLVCSILMCYIDTN 648
            LPLR  +A +     L   C+G      + +L+PA+ CD+LKG IL++C  +M Y+D +
Sbjct: 129 LLPLRVFLALFRL---LTLPCYGLR---DRRLLQPAQVCDILKGVILVICYFMMHYVDYS 182

Query: 649 MMYHLVKSQSVMKLYIFYNMLE 714
           MMYHL++ QSV+KLYI YNMLE
Sbjct: 183 MMYHLIRGQSVIKLYIIYNMLE 204


>AF189251-1|AAF28308.1|  345|Homo sapiens cytomegalovirus partial
           fusion receptor protein.
          Length = 345

 Score = 81.8 bits (193), Expect = 2e-15
 Identities = 33/60 (55%), Positives = 46/60 (76%)
 Frame = +1

Query: 535 GFSSHYSKSILKPAETCDVLKGFILLVCSILMCYIDTNMMYHLVKSQSVMKLYIFYNMLE 714
           G   H  + +L+PA+ CD+LKG IL++C  +M Y+D +MMYHL++ QSV+KLYI YNMLE
Sbjct: 58  GPGPHRDRRLLQPAQVCDILKGVILVICYFMMHYVDYSMMYHLIRGQSVIKLYIIYNMLE 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,344,972
Number of Sequences: 237096
Number of extensions: 1681402
Number of successful extensions: 2461
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2458
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)