Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c18
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.94 
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    25   0.94 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   1.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   3.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +1

Query: 457 FVYTFLPLRFLIAFWSF-CNRLFRN 528
           F+Y F    F +AFW   C + F++
Sbjct: 357 FIYAFYSADFRLAFWRLTCRKCFKS 381


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 496 FWSFCNRLFRNCFGFSSHYSK 558
           FW F    F +  G + HYSK
Sbjct: 38  FWLFVGTYFPSLIGANEHYSK 58


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 22/97 (22%), Positives = 38/97 (39%)
 Frame = +1

Query: 127 LLHIKKMSTTNNEIYDQPKRLRFKSVTNVQQSSNEITSTAIGKDIRCRDEEKSASLFAFL 306
           +++IKK    + +       LR ++      SS      +  +D R R+  K    +  L
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRD-RNREYRKKDRRYEKL 255

Query: 307 HVELTRGYLLEHDEERFSARREKVYSFIKIPQELEKF 417
           H E  +        ER+S  RE+     K  +E  K+
Sbjct: 256 HNEKEKLLEERTSRERYSRSREREQKSYKNEREYRKY 292


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 111 LNKLGCWCLINHNLDLLKKR 52
           +N LG  C+I   L L+KK+
Sbjct: 114 INLLGLTCMIQEVLKLMKKK 133


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = +1

Query: 256 DIRCRDEEKSASLFAFLHVELTRGYLLEHDEERFSARREKVYSFIKIPQELEKFMAYGFF 435
           DIR  ++++   LF ++H ++    +  ++ ER   R  +V  FI   + + +     +F
Sbjct: 221 DIRIVNKDRRGELFYYMHQQI----MARYNCERLCNRLGRVKRFINWHEPIPE----AYF 272

Query: 436 QCADSLLFVYTFLPLR 483
              DSL+   T+ P R
Sbjct: 273 PKLDSLVASRTW-PFR 287


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 105 KLGCWCLINHNLDLLKKRKSM 43
           K+  +CL  HN+ L  K +S+
Sbjct: 600 KMPRYCLFGHNVTLANKFESL 620


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,336
Number of Sequences: 438
Number of extensions: 3382
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)