Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c16
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.8  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   2.4  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    23   9.6  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    23   9.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = +3

Query: 30  CNKKHRFILILLTFSSHFTNVPTLKYISFTCTAAFQKNSNFLKN*LKIKISSNDEFNKLR 209
           C +KH   L  +   S    VP+   ++ T  A   K +  L     I +  ND+  K+R
Sbjct: 399 CKRKHHSKLCKIGRLSEVEVVPSTSRLTATAQANCSKKTVILSTAQIIILDVNDQPYKVR 458

Query: 210 PVIAQADQI 236
            ++    Q+
Sbjct: 459 ALLDNGSQL 467


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 409 FPSLAARGSVLRTTFF---SACGLTGAGLGVEGTRAACSRIA 293
           +P +   GS     F+   +A     AG+GV+   +ACS+++
Sbjct: 41  YPPMGVPGSASIAQFYQQAAAVSAASAGVGVDSLGSACSQLS 82


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 328 VEGTRAACSRIAFFCSCPA 272
           + GT  AC  +  F  CPA
Sbjct: 138 ISGTILACMGMTLFAECPA 156


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 328 VEGTRAACSRIAFFCSCPA 272
           + GT  AC  +  F  CPA
Sbjct: 188 ISGTILACMGMTLFAECPA 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,901
Number of Sequences: 2352
Number of extensions: 7917
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)