Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c13
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         29   0.16 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   6.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.9  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -3

Query: 544 IRIFLVLSSSGCAVITSHNASFLCATITARNLLIIF--LKSFKRPFS 410
           I + L LSSS C   TS +  FLC  + +   LI +   KS K  F+
Sbjct: 44  IALSLTLSSSSCKQSTSLSFVFLCCCVPSSERLIYYYMCKSTKNTFT 90


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 341 LCLRCRINYT 312
           LC+RCR+ YT
Sbjct: 116 LCMRCRVEYT 125


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +3

Query: 228  NQLDDVEKHLQILNKELLKPKMIDFIETCVINSAAKAKMLKQVANEAGMPDTAINFLELV 407
            N LDD+E+ L    KEL   ++   + + V     + + ++    E       +  +EL+
Sbjct: 1548 NSLDDLERRLSAAEKELEDAQLTKRLSSLVEAKNIQNQNIRSYQKELADLRLEVANIELI 1607

Query: 408  AEN 416
            A +
Sbjct: 1608 ANS 1610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,800
Number of Sequences: 2352
Number of extensions: 17771
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)