Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c13
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   1.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   4.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.5  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   7.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.6  

>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +3

Query: 516 LDDSTRKILMDALKKFVKEGKNIQLTEKVDPSIMGGMIVGI 638
           L D    +  D++     + +N   +E  DP ++ G+++G+
Sbjct: 71  LSDGLMCVEKDSIHSIDGDEENGLTSESTDPGLVAGIVIGV 111


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 529 VLSSSGCAVITSHNASFLCATITARNLLI 443
           +L S  CA+   HNA  + A +  +N+L+
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILM 188


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 654 DMSIARKIQMYTDILKQSV*YYRIQWYKIKQ*LSS*NKKK 773
           D+   ++I+   D+L+QSV    +  YK K      NKKK
Sbjct: 175 DVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKK 214


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 185 FNTKYWYWRLFSESNGTHESSKNAGHDINKQICNL*NKKN 66
           +N  Y+Y    S+SNG++ S+ +     NK+     N+KN
Sbjct: 138 YNDNYFY----SKSNGSNSSNSDVLFKQNKEEEQTINRKN 173


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 197 YIPPFNTKYWYWRLFSESNGT 135
           YIP     ++YWR+++ +  T
Sbjct: 257 YIPMLVMLFFYWRIYNAAVST 277


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = +3

Query: 591 TEKVDPSIMGGMIVGI 638
           +E  DP ++ G+++G+
Sbjct: 125 SESTDPGLVAGIVIGV 140


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 546 DALKKFVKEGKNIQLTEKVDPSIMG 620
           DAL K  KE     LT + DP   G
Sbjct: 100 DALPKLFKEWGTTNLTFEEDPEPFG 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,240
Number of Sequences: 438
Number of extensions: 5062
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)