BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3c11
(703 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 24 1.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 24 1.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.4
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 2.4
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 2.4
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 23 2.4
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 23 2.4
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 23 2.4
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 23 2.4
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 23 2.4
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 23 3.2
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 3.2
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 4.2
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 5.6
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 5.6
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 5.6
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 5.6
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 529 SGVLCSYYTPIFDTYPISLQPYF 461
+G LC+ Y P+ P+ L P F
Sbjct: 167 AGFLCNNYLPLPQVPPLPLPPIF 189
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 529 SGVLCSYYTPIFDTYPISLQPYF 461
+G LC+ Y P+ P+ L P F
Sbjct: 167 TGFLCNNYPPLPQVPPLPLPPIF 189
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 484 DKYQKLGCNMSIKLHFLDSHVDFFPDN 564
DKY +L N S + F+ VDF N
Sbjct: 1909 DKYSRLVNNPSARRRFIAHVVDFIETN 1935
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 17 IYFLNFFLLIYKISMLLVRVGQYSTRQALRSK 112
IY N F L + LLV V +S Q +K
Sbjct: 316 IYTFNLFYLCFCFYWLLVMVAMFSRTQQSANK 347
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 17 IYFLNFFLLIYKISMLLVRVGQYSTRQALRSK 112
IY N F L + LLV V +S Q +K
Sbjct: 272 IYTFNLFYLCFCFYWLLVMVAMFSRTQQSANK 303
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 673 SSNQPSYSHSIDLGTLSP*FLCPD 602
S +P SH+ DLG L L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 673 SSNQPSYSHSIDLGTLSP*FLCPD 602
S +P SH+ DLG L L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 673 SSNQPSYSHSIDLGTLSP*FLCPD 602
S +P SH+ DLG L L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 673 SSNQPSYSHSIDLGTLSP*FLCPD 602
S +P SH+ DLG L L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 673 SSNQPSYSHSIDLGTLSP*FLCPD 602
S +P SH+ DLG L L PD
Sbjct: 426 SITEPGVSHADDLGYLFTNLLTPD 449
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 589 PALYCNHQDYQEKSPHVNLESGVLCSYY 506
P N+Q Q S + N + G C YY
Sbjct: 209 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 236
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 589 PALYCNHQDYQEKSPHVNLESGVLCSYY 506
P N+Q Q S + N + G C YY
Sbjct: 229 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 256
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 682 SVTSSNQPSYSHSIDL 635
SVT N P Y+ SID+
Sbjct: 219 SVTGQNAPLYASSIDV 234
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 583 LYCNHQDYQEKSPHVNLESGV 521
+Y +HQ + +P +N E+G+
Sbjct: 63 VYYHHQTIPQDNPIINTETGL 83
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.8 bits (44), Expect = 5.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +1
Query: 445 KHPDYKNKVANLLDKYQK 498
+H + NK+ NL+D++ +
Sbjct: 211 EHQNLHNKICNLIDEFNE 228
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 583 LYCNHQDYQEKSPHVNLESGV 521
+Y +HQ + +P +N E+G+
Sbjct: 63 VYYHHQTIPQDNPIINTETGL 83
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 583 LYCNHQDYQEKSPHVNLESGV 521
+Y +HQ + +P +N E+G+
Sbjct: 63 VYYHHQTIPQDNPIINTETGL 83
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,982
Number of Sequences: 336
Number of extensions: 3934
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -