Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c06
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    24   5.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   9.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   9.7  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 132 VDNATAPLPINHDFTPQD 185
           VD+A  PLP N D  P+D
Sbjct: 47  VDDAEQPLPPNGDELPED 64


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 341 WLVIVSRSVAYENQDLPRQTAHVTRRG*HLLFQLAD 234
           WL I  +  +Y    +  +  H    G + LFQL D
Sbjct: 45  WLCIAEQGASYNGSAVNARFKHYGGSGYYGLFQLID 80


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 393 GWSCYGLGELKLLSYKPEGTHLCRKIHHM-YHCKEDD 500
           GWS   + E+     + +  + C K+ H  YHC+E D
Sbjct: 262 GWSICHIREVM----EEQKCYKCWKVGHTSYHCREPD 294


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,193
Number of Sequences: 2352
Number of extensions: 16704
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)