Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c02
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 264 SSLFPPLAA*IFFKTSKALSSSPLFAKNLGLS 169
           SS F P        TS AL+S+PL   N+  S
Sbjct: 3   SSKFSPSTTTTTTTTSSALNSTPLIEFNISTS 34


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 264 SSLFPPLAA*IFFKTSKALSSSPLFAKNLGLS 169
           SS F P        TS AL+S+PL   N+  S
Sbjct: 3   SSKFSPSTTTTTTTTSSALNSTPLIEFNISTS 34


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -2

Query: 450 IVGNHMKKTLFILQHSAIK*NSWTVRNNNGGLNIG 346
           ++   MK   ++L+      NSW       G N G
Sbjct: 407 LMAKSMKSPTYVLKFEYRSMNSWFEHETESGRNFG 441


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 462 SSTRYLMSGPTIRRSANEFSQIKLQTTLRLLFATTKSPTTPSILVSFTVSSSAW 623
           +S+  + + P +R S N    IK Q  L +   +T SPT  S   + + +SS W
Sbjct: 171 ASSPSVTAAPHLRDSPN---YIKPQ--LHVSTGSTSSPTIASATYTNSANSSIW 219


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 207 IKLWKS*RRFMLLTEEKEKTI 269
           IK+W   RR     EEK K +
Sbjct: 129 IKIWFQNRRMKFKKEEKNKVV 149


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 207 IKLWKS*RRFMLLTEEKEKTI 269
           IK+W   RR     EEK K +
Sbjct: 149 IKIWFQNRRMKFKKEEKNKVV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,145
Number of Sequences: 336
Number of extensions: 3928
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)