Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3c02
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 36 0.006
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 33 0.042
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 31 0.17
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 31 0.22
SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 30 0.29
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 30 0.39
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces ... 27 2.7
SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subuni... 27 2.7
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 27 2.7
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 27 3.6
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 26 4.8
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.3
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 26 6.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.3
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 25 8.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 8.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.3
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 8.3
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 35.9 bits (79), Expect = 0.006
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 WRLYTFIMA--LPLGIGALLMLFMHESPKFLANKGELDKALEVLKKIYAANG 250
WR + F M L A ++ ++ESPKF KG+ KA+E + KI NG
Sbjct: 250 WRYFLFTMGGMTLLMFAARFLVSVYESPKFYLAKGDDYKAVETIHKIARING 301
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 33.1 bits (72), Expect = 0.042
Identities = 25/100 (25%), Positives = 44/100 (44%)
Frame = +2
Query: 155 MLFMHESPKFLANKGELDKALEVLKKIYAANGGKREDYPVKHIITEELTTEKNTFWKTLR 334
MLF+ ESP++LA KG ++ +++L + N G D+P+ + +
Sbjct: 198 MLFLPESPRYLAVKGRNEECMKILTR----NAGLPADHPIMQKEYNAIQADVEAELAGGP 253
Query: 335 EQTVPIFKPPLLLRTVQLFYLMALCCSINNVFFMWFPTMV 454
IF + RT+ +MA N +F ++ T V
Sbjct: 254 CSWPQIFSNEIRYRTLLGMGVMAFQQLTGNNYFFYYGTQV 293
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 92 YRPWRLYTFIMALPLGIGALLMLFMH-ESPKFLANKGELDKALEVLKKIY 238
++ WR+ I A P +G L+ LF ESP++L ++K ++L +I+
Sbjct: 236 HQGWRIMFGIGAAP-ALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIH 284
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 30.7 bits (66), Expect = 0.22
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 143 GALLM---LFMHESPKFLANKGELDKALEVLKKIYAANGGKREDYPVKHIITEELTTEKN 313
G LLM LF+ ESP++L KG ++AL ++ + E P II T K+
Sbjct: 189 GILLMVGVLFLPESPRYLIYKGRDEEALRIMCNM-------AELSPESEIIQTNFNTIKS 241
Query: 314 TFWKTL---REQTVPIFKPPLLLRTVQLFYLMALCCSINNVFFMWFPTMV 454
+ + + + IF + RT F +M I N ++ ++ T V
Sbjct: 242 DIEIEMAGGKARWIEIFGKDIRYRTCLGFLVMLFRELIGNNYYFYYATQV 291
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 49 STELSAGSSVVGYHLPTLAVVHFHHGFTTGYRSFVDALYAREP*VFG 189
+T++ G+ + LP + + + G T G +D L R P +FG
Sbjct: 288 ATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334
>SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 674
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 716 VPLGCS*LRIRSGSRLGAFVF*KLLEPRWLSP 621
+PLGC+ LR+ + ++ GA + +L+P W SP
Sbjct: 630 MPLGCNILRVDAQTKDGALMDMLILQPIWRSP 661
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 30.3 bits (65), Expect = 0.29
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Frame = +2
Query: 101 WRLYTFIMALPLGIGALL-MLFMHESPKFLANKGELDKALEVLKKIYAANGGKREDYPVK 277
WR +F + + GI ++ +LF+ ESP++L KG ++AL ++ + E P
Sbjct: 178 WRT-SFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIMCQ-------TAELDPES 229
Query: 278 HIITEELTTEKNTFWKTL---REQTVPIFKPPLLLRTVQLFYLMALCCSINNVFFMWFPT 448
II T K+ + + + +F + RTV F M L I N ++ ++ T
Sbjct: 230 EIIQTNFNTIKSDIEMEMAGGKARWPEVFGKEVRYRTVLGFLTMLLRELIGNNYYFYYAT 289
Query: 449 MV 454
V
Sbjct: 290 QV 291
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 49 STELSAGSSVVGYHLPTLAVVHFHHGFTTGYRSFVDALYAREP*VFG 189
+T++ G+ + LP + + + G T G +D L R P +FG
Sbjct: 288 ATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 29.9 bits (64), Expect = 0.39
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 101 WRLYTFIMALPLGIGALLMLFMHESPKFLANKGELDKALEVLKKIY 238
WR + +P +++++ ESP+ L K +A L +IY
Sbjct: 246 WRWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIY 291
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 200 ELDKALEVLKKIYAANGGKREDYPVKHIITEELTTEKNTFW 322
E+ K LE +IY+ N ED PV + I +T+ FW
Sbjct: 136 EVQKVLEAEPQIYSYNLKVLEDDPVDYRIVLRESTDLQWFW 176
>SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 461
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 71 VPWLGITYRPWRLYTFIMALPLGIGAL 151
+P LG R +LYT + LPLG GAL
Sbjct: 179 LPLLGDLGRLRQLYTRVSQLPLGAGAL 205
>SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subunit
3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 90
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 59 FQLEVPWLGITYRPWRLYTFIMALPLGIGALLM 157
F LE PW T RP+ Y FI+A +G L+
Sbjct: 24 FDLEEPWS--TLRPYTPYLFILAFGSYLGITLL 54
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 89 TYRPWRLYTFIMALPLGIGALL-MLFMHESPKFLANKGELDKALEVL 226
T WR+ I L GI L+ ++F+ ESP++L G+ D+AL+++
Sbjct: 144 TTAQWRISIGINLL-WGIITLVGIIFLPESPRYLIAIGKDDEALKIM 189
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 101 WRLYTFIMALPLGIGALLMLFMHESPKFLANKGELDKALEVLKK 232
WR+ I L I + +LF+ ESP++L G+ ++A+ VL +
Sbjct: 182 WRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSE 225
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 26.2 bits (55), Expect = 4.8
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 158 LFMHESPK-FLANKGELDKALEVLKKIYAANGGKREDYPVKHIITEELTTEKNTFWKTLR 334
LF E PK + +KG D + L+ + D+ ++ TE L E WK
Sbjct: 110 LFNDEKPKKIIYSKGGNDGKEDDLQNVNEPQDAYSNDHDIQSKDTELLGNEYCLEWKNPH 169
Query: 335 EQTVPIFKPPLL 370
V K P+L
Sbjct: 170 LTNVGTLKAPIL 181
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +1
Query: 13 FASNTWLSVLNPSTELSAGSSVVGYHLPTLAVVHFHH-----GFTTGYRSF 150
+A + LN GS +GY LA V FH GF+TG+ F
Sbjct: 212 YADSDITIALNADANFYFGSGDMGYEAVDLAYVLFHEITHGLGFSTGWGVF 262
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 37 VLNPSTELSAGSSVVGYHLPTLAVVHF 117
++ PST L S + H+P+L V H+
Sbjct: 335 IITPSTILDQWLSEIDLHVPSLKVFHY 361
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 462 SSTRYLMSGPTIRRSANEFSQIKLQTTLRLLFATTKSPTTPSILVSFTVSSSAW 623
+ + Y S I S S + + T+ + +T P TPS L S SSS++
Sbjct: 225 TESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTLSSPASSSSSY 278
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 451 HCREPHEENVVYTTAQCH 398
H R P E+V+YT CH
Sbjct: 216 HYRHPVGEDVIYTCPSCH 233
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 224 LKKIYAANGGKREDYPVKHIITEELTTEK 310
+KKI + KR+D +KH+I E +K
Sbjct: 841 VKKIAGLDPSKRKDSKLKHVIINEKRNKK 869
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 462 SSTRYLMSGPTIRRSANEFSQIKLQTTL 545
SSTRY + G S +F ++KLQ ++
Sbjct: 612 SSTRYALYGEWSSTSMKKFPELKLQNSI 639
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 216 KALSSSPLFAKNLGLSCIKSINKAPIP 136
++ S SP + + L +SC S +++P P
Sbjct: 756 RSFSRSPSYRRRLSMSCSVSYSRSPSP 782
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,126,711
Number of Sequences: 5004
Number of extensions: 67038
Number of successful extensions: 206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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