Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3c01
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical pr...    31   0.56 
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    29   1.3  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    28   3.9  
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    28   3.9  
Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical pr...    27   5.2  
AF125964-5|AAP13765.1|  722|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF125964-2|AAD14754.1|  726|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    27   9.1  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    27   9.1  

>Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical
           protein T06D8.2 protein.
          Length = 708

 Score = 30.7 bits (66), Expect = 0.56
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 102 KWLLKMSNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMDPFAHRDLRPEM 281
           K + ++ N   +    E  + A +L+ ++ A     LAS+DPRL  D  P      RP+ 
Sbjct: 205 KEMEELENDKGEAVADEDFQRANDLQDEITALRSNILASVDPRLLEDTMPRNEEIHRPKN 264

Query: 282 MF 287
           +F
Sbjct: 265 LF 266


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 195 RFDQQLASIDPRLKIDMDPFAHRDLRPEM 281
           R+D +L  I  +LKI +D  A RDL P++
Sbjct: 48  RYDLRLRQIAEKLKIAVDEMAGRDLHPKL 76


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical
           protein F11A6.1b protein.
          Length = 760

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical
           protein T01H3.4 protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 180 LPIPLLLPFFRVHFHHLVRSTFSTATSTRPMKIYLPNFDYE 58
           LP P  L F+   FHH    TF  AT +  M  Y PNF+++
Sbjct: 412 LPSPAFLYFY---FHHW---TFFNATKSLLMLGYKPNFEFK 446


>AF125964-5|AAP13765.1|  722|Caenorhabditis elegans Hypothetical
           protein W03G1.6b protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 252 FAHRDLRPEMMFIREEL 302
           +AHRDL+PE + + E+L
Sbjct: 128 YAHRDLKPENLLLTEDL 144


>AF125964-2|AAD14754.1|  726|Caenorhabditis elegans Hypothetical
           protein W03G1.6a protein.
          Length = 726

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 252 FAHRDLRPEMMFIREEL 302
           +AHRDL+PE + + E+L
Sbjct: 128 YAHRDLKPENLLLTEDL 144


>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 138 ENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMDPFAHRD--LRPEMMFIREELRQA 311
           E+  EK+   G L A++   F     +I+ ++K DM+     +  +R + + + + LR+ 
Sbjct: 665 EDMTEKLTNIGRLAANLKTDFPPIQMAIEQQIKRDMERVVREEKFIRDQSIAVDQSLRRC 724

Query: 312 K 314
           K
Sbjct: 725 K 725


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 138 ENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMDPFAHRD--LRPEMMFIREELRQA 311
           E+  EK+   G L A++   F     +I+ ++K DM+     +  +R + + + + LR+ 
Sbjct: 564 EDMTEKLTNIGRLAANLKTDFPPIQMAIEQQIKRDMERVVREEKFIRDQSIAVDQSLRRC 623

Query: 312 K 314
           K
Sbjct: 624 K 624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,730,506
Number of Sequences: 27780
Number of extensions: 186204
Number of successful extensions: 640
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)