Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b21
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               25   0.48 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   4.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.5  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   7.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.8  

>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 240 CKQLHTAVILLSNTTXSPSDLCICRAPCISAC 145
           C  L  +VIL+++   +P   C C+AP  + C
Sbjct: 7   CIYLFLSVILITSYFVTPVMPCNCKAPETALC 38


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 237 YTAYCVCRSLPVIFYLLLGVYYFVCQTVWCILFCS*R 347
           +  YC     P I+ L    + F  +++ C  FC  R
Sbjct: 49  WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRR 85


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 237 YTAYCVCRSLPVIFYLLLGVYYFVCQTVWCILFCS*R 347
           +  YC     P I+ L    + F  +++ C  FC  R
Sbjct: 497 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRR 533


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 185 EGEXVVFDKRITAVCSCL 238
           EG   V DK++   C C+
Sbjct: 49  EGNIDVEDKKVQLYCECI 66


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 258 RSLPVIFYLLLGVYYF 305
           +SLPVIF++  G + F
Sbjct: 120 QSLPVIFWIHGGAFQF 135


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 258 RSLPVIFYLLLGVYYF 305
           +SLPVIF++  G + F
Sbjct: 120 QSLPVIFWIHGGAFQF 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,689
Number of Sequences: 438
Number of extensions: 2012
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)