Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b19
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...   132   1e-31
AL021566-1|CAA16501.1|  328|Caenorhabditis elegans Hypothetical ...    28   4.9  

>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score =  132 bits (320), Expect = 1e-31
 Identities = 66/123 (53%), Positives = 80/123 (65%)
 Frame = +1

Query: 169 SLALTTVVIGNAYYQKKQFYPSIVYLTNSNPSMAVMYLQAFILVLLVGKMLRKIFFGQLR 348
           S   T   I NA+   KQFYPSIVYL+ SN SMAV+Y+Q  +LV L+ ++L+ I FG LR
Sbjct: 12  SCVATAATILNAFLINKQFYPSIVYLSKSNASMAVIYVQGIVLVYLMFQLLKSILFGDLR 71

Query: 349 PAEFEHLIERSWYAXTETCLAFTVFRDDFNPKFIXXXXXXXXXXXXXXXXEDRVDYMERS 528
            AE EHL ER+W+A  ETCLAFTVFRDDF+  F+                +DRVD MERS
Sbjct: 72  AAEAEHLSERTWHAVLETCLAFTVFRDDFSAIFVMQFIGLLFIKCFHWLADDRVDMMERS 131

Query: 529 PVI 537
           PVI
Sbjct: 132 PVI 134


>AL021566-1|CAA16501.1|  328|Caenorhabditis elegans Hypothetical
           protein F08E10.1 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 236 IEG*NCFFW*YALPITTVVSARLITVANTAFILIVFRSSFEMISSCASLIKFLCTPKY 63
           IE    FF+     IT V ++  +T  N  FIL   +S +  I   A +  ++  P Y
Sbjct: 87  IESPGLFFYLAITFITGVTTSVFVTFENRFFILFAQKSFWRHIRKFAIVFSYIIVPLY 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,852,723
Number of Sequences: 27780
Number of extensions: 199458
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)