Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3b16
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254... 31 0.67
05_03_0061 + 7912322-7912658,7914617-7914747,7914875-7914938,791... 31 0.67
02_02_0402 - 9852407-9853519 31 1.2
11_01_0545 + 4308167-4308496 30 1.5
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 30 2.0
02_01_0292 + 1949926-1950037,1950121-1950250,1950551-1950616,195... 30 2.0
01_07_0117 + 41171919-41172395 30 2.0
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 29 2.7
07_03_0812 - 21694348-21694632,21695392-21695574,21696366-21697526 29 2.7
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 29 3.5
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 3.5
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376... 29 3.5
03_05_0062 + 20370608-20370977,20371062-20371541,20371661-203717... 29 3.5
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 28 6.2
09_03_0078 + 12137124-12137672 28 6.2
08_02_1518 + 27644404-27645135 28 6.2
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 28 8.2
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019... 28 8.2
09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475 28 8.2
07_01_0244 + 1786009-1788048 28 8.2
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312 28 8.2
06_03_1150 + 28022633-28023374,28023501-28023565 28 8.2
04_04_0765 - 27910189-27912393,27912521-27912598 28 8.2
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 28 8.2
>08_02_1569 -
27924930-27925034,27925149-27925167,27925271-27925490,
27925925-27925971,27926502-27927025
Length = 304
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -1
Query: 249 SAPPQSSI----VLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQHFPSGLGGVAV 85
SAPP SS S+ S ++S GY G P + P S Q +P G+GG V
Sbjct: 17 SAPPASSYGYTTTPSAPPASSSSSYGYGHGGGGYPSSTYPPPPPSSSQAYPMGMGGFLV 75
>05_03_0061 +
7912322-7912658,7914617-7914747,7914875-7914938,
7915286-7915512,7915869-7916396,7916860-7916919
Length = 448
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 127 GHSRRRQNRWWCARIHRLV-SLAGGH 201
GH + + RWW A + ++V SLAGGH
Sbjct: 78 GHGCQGEPRWWSAAMEKVVHSLAGGH 103
>02_02_0402 - 9852407-9853519
Length = 370
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 14 TAPQSTAVTTTPRPKRVHACQSEMTATPPNPEGKCCGRDIAV 139
+ P+S++ ++ RPK VH Q++ PP P+ R A+
Sbjct: 161 SGPESSSTASSKRPKTVHRQQNKSPLPPPPPKRAARARFAAI 202
>11_01_0545 + 4308167-4308496
Length = 109
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -2
Query: 452 SRGEVWSSQCLS*PMGPCNPCRPLIRTRNHG--PGSSCCTRRD-ALFSACLHPRSLLS 288
S G+ +++ C+ P+ C+ IR R+ G PGS+C T +D L+ C H R L S
Sbjct: 53 SYGDTYAT-CI--PVAACDDTGCAIRCRDLGYNPGSACWTSKDIKLYCCCGHGRRLPS 107
>09_04_0308 +
16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 255 LMSAPPQSSIVLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQH 115
L+S+PP + LS L S+ S G DAGA +P+ P H
Sbjct: 75 LLSSPPPPRLTLS-LPRSVAVSGGGGGHDAGAAAAAATPSVSLSPNH 120
>02_01_0292 +
1949926-1950037,1950121-1950250,1950551-1950616,
1950718-1950789,1951198-1951607,1951789-1951994,
1952121-1952407,1952527-1952665,1952746-1953141
Length = 605
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 295 SFHAMTGSEHVLPADERPATEQH-RPLEPHILDDHQPRIRVDGCG 164
+ A E++ +R QH RP H+L D + R+RV GCG
Sbjct: 420 ALEAAKALEYLHEGGQRQVVHQHFRP--EHVLVDGEMRVRVSGCG 462
>01_07_0117 + 41171919-41172395
Length = 158
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = -1
Query: 426 MPILTNGSVQSVPPADTDTQSRPGFVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMS 247
MP+L + S A+ + P SP +P S +APF PAV+
Sbjct: 74 MPLLPSPGPDSDGSAEAPSDVMPTIPSSPSPPNPDALLPDSALAPFGSAPAVAAQ---SR 130
Query: 246 APPQSSIVLSSLTYSMTTSQGYESM 172
APP S+ ++ +++ + G +M
Sbjct: 131 APPPSTTTAAAAAWALPVAVGLVAM 155
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -3
Query: 274 SEHVLPAD---ERPATEQHRPLEPHILDDHQPRIRVDGCGRTTNDFVSDGYVPAATLPFR 104
+ H PA+ +R + P+E + DH + DG G ++D +V
Sbjct: 1019 ASHAQPAEMNLQRDSPVSSEPIEAELAGDHGEEL--DGRGNELE--LADDHVE------E 1068
Query: 103 IRGGGSHLALAGVHPLRSGGRG 38
+ GG+ L LAG H GGRG
Sbjct: 1069 LDSGGNELELAGDHREELGGRG 1090
>07_03_0812 - 21694348-21694632,21695392-21695574,21696366-21697526
Length = 542
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 473 RKHDIGLIR-LQSIAPFTDFIRPICLPST 556
R+H++ L+R L +AP D +R IC PS+
Sbjct: 486 RQHELDLVRVLVRVAPALDLVRIICHPSS 514
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 50 RPKRVHACQSEMTATPPNPEGKCCGRDIAVGDKIVGGAPASIDSYPWLVVIEYVRLERTM 229
RP RV AC + T TPP P A ++ + A ++ +V Y R R +
Sbjct: 30 RPSRVTACLATPTPTPPPPTSAPLAPAAAARRELSAASRAVVEDEARYIVGTYNR-SRVV 88
Query: 230 LLCG 241
L+ G
Sbjct: 89 LVAG 92
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 56 KRVHACQSEMTATPPNPEGKCCGRDIA 136
+++H+C+S M+ +PP + C +D A
Sbjct: 802 RKLHSCKSSMSPSPPKSRNRQCLKDTA 828
>03_05_0832 -
28037047-28037315,28037428-28037530,28037664-28037695,
28037788-28038005,28038145-28038260,28038514-28038757,
28039129-28039216,28039513-28039588,28040126-28040164,
28040347-28040405,28041292-28041529
Length = 493
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 317 PKTVRLGEYNT-TNPGRDCVSVSAGGTDCTDPLV 415
P+ V L Y+ TNP + C +AGG T+P +
Sbjct: 194 PRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYI 227
>03_05_0062 +
20370608-20370977,20371062-20371541,20371661-20371731,
20371836-20371912,20372076-20372223,20372346-20372507,
20372743-20372940
Length = 501
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 315 VPTSKIAPFTQ*PAVSTYFPLMSAPP----QSSIVLSSLTYSMTTSQGYESMDAGAPPTI 148
+P+ P ++T P + PP S I+ SSLT + T+ ++ AGAPP
Sbjct: 1 MPSPGTPPSPPTTLITTQAPPIQPPPPPGGNSMIMPSSLTTAGTSQSPPDATTAGAPPP- 59
Query: 147 LSPTAMSRPQHFPSGL 100
+P+ + + PSGL
Sbjct: 60 PAPSVGAWGGNVPSGL 75
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 28.3 bits (60), Expect = 6.2
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = -1
Query: 414 TNGSVQSV--PPADTDTQSRPGFVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAP 241
+NGS +SV A + T S P F R + V +S I Q PA++ F +S+
Sbjct: 672 SNGSTKSVCSTNAGSSTPSFPKFSFQPGFRTSTSSVQSSGI----QEPAITAPFSTVSSL 727
Query: 240 PQSSIVLSSLTYSMTTSQGYESMDAGAPPTILSPTAMS 127
S SS+ ++ TSQ +G+ P S + S
Sbjct: 728 AGGSSSPSSMIFAGATSQSSSITTSGSVPFQFSSQSSS 765
>09_03_0078 + 12137124-12137672
Length = 182
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 214 AREDDAALWRGAHQREV-RAHCRSLRERSDLGCRHAENSASRR 339
A E+DA+ + R+V A R+LR RSD RH + +RR
Sbjct: 134 AAEEDASSSSSSLARDVWEAQLRTLRARSDERRRHGADGTARR 176
>08_02_1518 + 27644404-27645135
Length = 243
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2
Query: 632 HCRTASIVPSQPRSERIYLAGSLCNL 555
H R+AS VPS PRS I + G L NL
Sbjct: 4 HLRSAS-VPSSPRSNEIDIEGQLQNL 28
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 223 DDAALWRGAHQREVRAHCRSLRERSDLGCRHAENSASRRVQHDEPGP*LRVRISGRHGLH 402
DD WR Q+ V+ S RS C H ++V+H E G + G+H
Sbjct: 270 DDGYNWRKYGQKVVKG---SDCPRSYYKCTHPNCPVKKKVEHAEDGQISEIIYKGKHNHQ 326
Query: 403 GP 408
P
Sbjct: 327 RP 328
>11_08_0019 +
27697918-27698609,27701107-27701372,27701778-27701948,
27702187-27703166,27703723-27703804,27704148-27704170
Length = 737
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 199 DHQPRIRVDGCGRTTN-DFVSDGYVPAATLPFRIRGGGSHLA 77
+H+ +R+ GC TN + Y+P +L + G G+H+A
Sbjct: 484 NHKNVVRLVGCCLETNVPMLVSAYIPKGSLHDVLHGNGNHVA 525
>09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475
Length = 345
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 246 APPQSSIVLSSLTYSMTTSQG--YESMDAGAPPTILSPTAMSRPQHFP 109
APP ++V S+ +++ TSQ Y G PP + A +PQ P
Sbjct: 10 APPPQAVVSSTAPFAVPTSQAAPYPYGGLGFPPPPTAWLASPQPQAMP 57
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 652 LAASNCPIVELQVSSPASHGQSEFT 578
L+AS PI +VSS + HG ++FT
Sbjct: 380 LSASGMPIAVKRVSSESRHGMTQFT 404
>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
Length = 270
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 321 FGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMDAGAPP 154
F P+S ++P +Q S P +PPQ L+ L M+ + + A PP
Sbjct: 133 FPFPSSPVSPPSQASPASPAAPAPPSPPQPKECLTPLLSMMSCADYLTNSSAQTPP 188
>06_03_1150 + 28022633-28023374,28023501-28023565
Length = 268
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 321 FGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYSMTTSQGYESMDAGAPP 154
F P+S ++P +Q S P +PPQ L+ L M+ + + A PP
Sbjct: 133 FPFPSSPVSPPSQASPASPAAPAPPSPPQPKECLTPLLSMMSCADYLTNSSAQTPP 188
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -1
Query: 258 PLMSAPPQSSIVLSSLTYSMTTSQGYESMDAGAPPTILSPTAMSRPQHFPSGLGGVAVIS 79
P++ P S+ + SL M ++ ++ APP ++ A+S P+GL ++S
Sbjct: 230 PMLIPPSLSTSLAGSLDAVMAGAESAAGAESAAPPPHVAAVALSPRAASPAGLLSPGLVS 289
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -1
Query: 384 ADTDTQSRPGFVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYF--PLMSAPPQSSIVLSSL 211
A + Q++ +V RT P+S+ + P VS++ P+ SA P+S+++ +L
Sbjct: 524 ASLEVQNKVEYVKKERATRTGGIKPSSRASALNMKPKVSSFNAKPVKSALPKSAVLKKTL 583
Query: 210 TYSMTTSQGYESMDAGAPPTIL 145
+ + G PP ++
Sbjct: 584 KIDESLFSAKSFEELGLPPLLI 605
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,221,138
Number of Sequences: 37544
Number of extensions: 595513
Number of successful extensions: 1940
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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