Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b16
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    58   8e-11
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    26   0.30 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    26   0.30 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 58.0 bits (134), Expect = 8e-11
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
 Frame = +2

Query: 146 KIVGGAPASIDSYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPK- 322
           +IVGG    I+ +P +  I+  R     ++CG  +IS +YVLTA HC    I+D  T K 
Sbjct: 160 RIVGGTNTGINEFPMMAGIK--RTYEPGMICGATIISKRYVLTAAHC----IIDENTTKL 213

Query: 323 TVRLGEYNTTNPGRDCVSVSAGGTDCTDPLVKIGIEKTIPHPDYQ--PYHFLRKHDIGLI 496
            + +GE++ ++               T+  V   I K I HP Y        + +DI L+
Sbjct: 214 AIVVGEHDWSSKTE------------TNATVLHSINKVIIHPKYDIIEKDDWQINDIALL 261

Query: 497 RLQSIAPFTDFIRPICLPSTDYTVNPPSKFALTVAGWG 610
           + +    F D + P CLP   + ++  +   +TV GWG
Sbjct: 262 KTEKDIKFGDKVGPACLPFQHF-LDSFAGSDVTVLGWG 298


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 180 ESMDAGAPPTILSPTAMSRPQHFPSGLGGVAVISLWQACTR-FGLGVVVTAVDCGAVTQ 7
           E++DA  PPT  +  A+  P      +GG+  + + +  T     G+VVT    G  T+
Sbjct: 173 EALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTE 231


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 180 ESMDAGAPPTILSPTAMSRPQHFPSGLGGVAVISLWQACTR-FGLGVVVTAVDCGAVTQ 7
           E++DA  PPT  +  A+  P      +GG+  + + +  T     G+VVT    G  T+
Sbjct: 230 EALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTE 288


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 339 SPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQS 232
           SP R   GVPTS I   T   +   Y   +  PP+S
Sbjct: 397 SPPRGPGGVPTSVIQAATSSVSDDLYLLELGFPPRS 432


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +2

Query: 2   ICCVTAPQSTAVTTTPRPKRVHACQSEMTATPP 100
           I  +T   +T  TTT      +  Q+    TPP
Sbjct: 658 ITTITTTTTTTTTTTTTTTTPNTTQNASATTPP 690


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 35  VTTTPRPKRVHACQSEM 85
           V +T RP R ++C+S+M
Sbjct: 398 VGSTRRPSRRNSCESQM 414


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 211 EAREDDAALWRGAHQREVRAHCRSLRE 291
           E+RE+ A     A +RE   HC   +E
Sbjct: 762 ESREEKATTSLEAEKREKSEHCEKGKE 788


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,575
Number of Sequences: 438
Number of extensions: 4981
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)